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Shaun Garnett
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Comparative reevaluation of FASP and enhanced FASP methods by LC–MS/MS
AJM Nel, S Garnett, JM Blackburn, NC Soares
Journal of proteome research 14 (3), 1637-1642, 2015
542015
Comparative Ser/Thr/Tyr phosphoproteomics between two mycobacterial species: the fast growing Mycobacterium smegmatis and the slow growing Mycobacterium bovis BCG
KC Nakedi, AJM Nel, S Garnett, JM Blackburn, NC Soares
Frontiers in microbiology 6, 128565, 2015
402015
A temporal proteome dynamics study reveals the molecular basis of induced phenotypic resistance in Mycobacterium smegmatis at sub-lethal rifampicin …
AD Giddey, E de Kock, KC Nakedi, S Garnett, AJM Nel, NC Soares, ...
Scientific reports 7 (1), 43858, 2017
282017
Proteogenomic analysis of Mycobacterium smegmatis using high resolution mass spectrometry
MG Potgieter, KC Nakedi, JM Ambler, AJM Nel, S Garnett, NC Soares, ...
Frontiers in microbiology 7, 173852, 2016
232016
Identification of novel physiological substrates of Mycobacterium bovis BCG protein kinase G (PknG) by label-free quantitative phosphoproteomics
KC Nakedi, B Calder, M Banerjee, A Giddey, AJM Nel, S Garnett, ...
Molecular & Cellular Proteomics 17 (7), 1365-1377, 2018
222018
Global proteome and phosphoproteome dynamics indicate novel mechanisms of vitamin C induced dormancy in Mycobacterium smegmatis
C Albeldas, N Ganief, B Calder, KC Nakedi, S Garnett, AJM Nel, ...
Journal of proteomics 180, 1-10, 2018
192018
Proteomic comparison of three clinical diarrhoeagenic drug-resistant Escherichia coli isolates grown on CHROMagar™ STEC media
JB Kalule, S Fortuin, B Calder, L Robberts, KH Keddy, AJM Nel, S Garnett, ...
Journal of proteomics 180, 25-35, 2018
192018
MetaNovo: a probabilistic approach to peptide and polymorphism discovery in complex metaproteomic datasets
MG Potgieter, AJM Nel, S Fortuin, S Garnett, JM Wendoh, DL Tabb, ...
BioRxiv, 605550, 2019
152019
Quantitative proteomic analysis of HIV‐1 Tat‐induced dysregulation in SH‐SY5Y neuroblastoma cells
T Ganief, P Gqamana, S Garnett, J Hoare, DJ Stein, J Joska, N Soares, ...
Proteomics 17 (6), 1600236, 2017
122017
Time-Dependent, HIV-Tat-Induced Perturbation of Human Neurons In Vitro: Towards a Model for the Molecular Pathology of HIV-Associated Neurocognitive …
KT Gurwitz, RJ Burman, BD Murugan, S Garnett, T Ganief, NC Soares, ...
Frontiers in molecular neuroscience 10, 163, 2017
102017
TB-IRIS: proteomic analysis of in vitro PBMC responses to Mycobacterium tuberculosis and response modulation by dexamethasone
L Bell, JM Peyper, S Garnett, R Tadokera, R Wilkinson, G Meintjes, ...
Experimental and Molecular Pathology 102 (2), 237-246, 2017
72017
A pilot study to show that asymptomatic sexually transmitted infections alter the foreskin epithelial proteome
NTL Chigorimbo-Murefu, M Potgieter, S Dzanibe, Z Gabazana, G Buri, ...
Frontiers in Microbiology 13, 928317, 2022
62022
MetaNovo: An open-source pipeline for probabilistic peptide discovery in complex metaproteomic datasets
MG Potgieter, AJM Nel, S Fortuin, S Garnett, JM Wendoh, DL Tabb, ...
PLOS Computational Biology 19 (6), e1011163, 2023
42023
Pro-MAP: a robust pipeline for the pre-processing of single channel protein microarray data
MO Mowoe, S Garnett, K Lennard, J Talbot, P Townsend, E Jonas, ...
BMC bioinformatics 23 (1), 534, 2022
22022
TB-IRIS: Proteomic analysis of in vitro PBMC responses to mycobacterium tuberculosis and response modulation by dexamethasone.
JM Blackburn, R Wilkinson, L Bell, R Tadokera, G Meintjes, S Garnett, ...
Elsevier:, 2017
12017
A mass spectrometry-based approach for the identification of Kpnβ1 binding partners in cancer cells
MO Okpara, C Hermann, PJ van der Watt, S Garnett, JM Blackburn, ...
Scientific reports 12 (1), 20171, 2022
2022
Generating a proteomic profile of neurogenesis, through the use of human foetal neural stem cells
S Garnett
2019
HIV-Tat treatment of human neurons in vitro over time: towards a model for the molecular pathology of HIV-associated neurocognitive disorders
KT Gurwitz, RJ Burman, B Murugan, S Garnett, T Ganief, NC Soares, ...
Frontiers in Molecular Neuroscience 10, 163, 2017
2017
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