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Jessie Huang
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Trajectorynet: A dynamic optimal transport network for modeling cellular dynamics
A Tong, J Huang, G Wolf, D Van Dijk, S Krishnaswamy
International conference on machine learning, 9526-9536, 2020
1122020
Guided fracture of films on soft substrates to create micro/nano-feature arrays with controlled periodicity
BC Kim, T Matsuoka, C Moraes, J Huang, MD Thouless, S Takayama
Scientific reports 3 (1), 3027, 2013
832013
Nanoscale squeezing in elastomeric nanochannels for single chromatin linearization
T Matsuoka, BC Kim, J Huang, NJ Douville, MD Thouless, S Takayama
Nano letters 12 (12), 6480-6484, 2012
572012
Fracture-based micro-and nanofabrication for biological applications
BC Kim, C Moraes, J Huang, MD Thouless, S Takayama
Biomaterials science 2 (3), 288-296, 2014
462014
Multiscale PHATE identifies multimodal signatures of COVID-19
M Kuchroo, J Huang, P Wong, JC Grenier, D Shung, A Tong, C Lucas, ...
Nature biotechnology 40 (5), 681-691, 2022
402022
Self-healing of pores in PLGAs
J Huang, JM Mazzara, SP Schwendeman, MD Thouless
Journal of controlled release 206, 20-29, 2015
402015
The control of crack arrays in thin films
J Huang, BC Kim, S Takayama, MD Thouless
Journal of materials science 49, 255-268, 2014
372014
Fracture‐based fabrication of normally closed, adjustable, and fully reversible microscale fluidic channels
BC Kim, C Moraes, J Huang, T Matsuoka, MD Thouless, S Takayama
Small 10 (19), 4020-4029, 2014
362014
Learning safe policies with expert guidance
J Huang, F Wu, D Precup, Y Cai
Advances in Neural Information Processing Systems 31, 2018
262018
Multi-view manifold learning of human brain-state trajectories
EL Busch, J Huang, A Benz, T Wallenstein, G Lajoie, G Wolf, ...
Nature computational science 3 (3), 240-253, 2023
182023
Multiscale PHATE exploration of SARS-CoV-2 data reveals multimodal signatures of disease
M Kuchroo, J Huang, P Wong, JC Grenier, D Shung, A Tong, C Lucas, ...
BioRxiv, 2020.11. 15.383661, 2020
162020
Neural network predicts need for red blood cell transfusion for patients with acute gastrointestinal bleeding admitted to the intensive care unit
D Shung, J Huang, E Castro, JK Tay, M Simonov, L Laine, R Batra, ...
Scientific Reports 11 (1), 8827, 2021
142021
Loss of the Krüppel-like factor 4 tumor suppressor is associated with epithelial-mesenchymal transition in colorectal cancer
KC Agbo, JZ Huang, AM Ghaleb, JL Williams, KR Shroyer, AB Bialkowska, ...
Journal of cancer metastasis and treatment 5, 2019
142019
Single-cell analysis reveals inflammatory interactions driving macular degeneration
M Kuchroo, M DiStasio, E Song, E Calapkulu, L Zhang, M Ige, AH Sheth, ...
Nature Communications 14 (1), 2589, 2023
112023
Exploring the geometry and topology of neural network loss landscapes
S Horoi, J Huang, B Rieck, G Lajoie, G Wolf, S Krishnaswamy
International Symposium on Intelligent Data Analysis, 171-184, 2022
92022
The collapse and expansion of liquid-filled elastic channels and cracks
F Meng, J Huang, MD Thouless
Journal of Applied Mechanics 82 (10), 101009, 2015
72015
Topological analysis of single-cell data reveals shared glial landscape of macular degeneration and neurodegenerative diseases
M Kuchroo, M DiStasio, E Calapkulu, M Ige, L Zhang, AH Sheth, M Menon, ...
Biorxiv, 2021.01. 19.427286, 2021
62021
Time-inhomogeneous diffusion geometry and topology
G Huguet, A Tong, B Rieck, J Huang, M Kuchroo, M Hirn, G Wolf, ...
SIAM Journal on Mathematics of Data Science 5 (2), 346-372, 2023
52023
Learning shared neural manifolds from multi-subject FMRI data
J Huang, E Busch, T Wallenstein, M Gerasimiuk, A Benz, G Lajoie, G Wolf, ...
2022 IEEE 32nd International Workshop on Machine Learning for Signal …, 2022
42022
Visualizing high-dimensional trajectories on the loss-landscape of ANNs
S Horoi, J Huang, G Wolf, S Krishnaswamy
22020
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