Saratram Gopalakrishnan
Saratram Gopalakrishnan
Department of Pediatrics, University of California San Diego
Verified email at ucsd.edu
Title
Cited by
Cited by
Year
Reversing methanogenesis to capture methane for liquid biofuel precursors
VWC Soo, MJ McAnulty, A Tripathi, F Zhu, L Zhang, E Hatzakis, PB Smith, ...
Microbial cell factories 15 (1), 1-14, 2016
892016
13C metabolic flux analysis at a genome-scale
S Gopalakrishnan, CD Maranas
Metabolic engineering 32, 12-22, 2015
642015
Deciphering cyanobacterial phenotypes for fast photoautotrophic growth via isotopically nonstationary metabolic flux analysis
MH Abernathy, J Yu, F Ma, M Liberton, J Ungerer, WD Hollinshead, ...
Biotechnology for biofuels 10 (1), 1-13, 2017
552017
Assessing methanotrophy and carbon fixation for biofuel production by Methanosarcina acetivorans
H Nazem-Bokaee, S Gopalakrishnan, JG Ferry, TK Wood, CD Maranas
Microbial cell factories 15 (1), 10, 2016
322016
Genome-scale fluxome of Synechococcus elongatus UTEX 2973 using transient 13C-labeling data
JI Hendry, S Gopalakrishnan, J Ungerer, HB Pakrasi, YJ Tang, ...
Plant physiology 179 (2), 761-769, 2019
302019
Methane oxidation by anaerobic archaea for conversion to liquid fuels
TJ Mueller, MJ Grisewood, H Nazem-Bokaee, S Gopalakrishnan, JG Ferry, ...
Journal of industrial microbiology & biotechnology 42 (3), 391-401, 2015
272015
Elucidation of photoautotrophic carbon flux topology in Synechocystis PCC 6803 using genome-scale carbon mapping models
S Gopalakrishnan, HB Pakrasi, CD Maranas
Metabolic engineering 47, 190-199, 2018
222018
From Escherichia coli mutant 13C labeling data to a core kinetic model: A kinetic model parameterization pipeline
CJ Foster, S Gopalakrishnan, MR Antoniewicz, CD Maranas
PLoS computational biology 15 (9), e1007319, 2019
152019
K-FIT: An accelerated kinetic parameterization algorithm using steady-state fluxomic data
S Gopalakrishnan, S Dash, C Maranas
Metabolic Engineering, 2020
142020
Redistribution of metabolic fluxes in Chlorella protothecoides by variation of media nitrogen concentration
S Gopalakrishnan, J Baker, L Kristoffersen, MJ Betenbaugh
Metabolic Engineering Communications 2, 124-131, 2015
122015
Achieving metabolic flux analysis for S. cerevisiae at a genome-scale: challenges, requirements, and considerations
S Gopalakrishnan, C Maranas
Metabolites 5 (3), 521-535, 2015
102015
Metabolic flux analysis reaching genome wide coverage: lessons learned and future perspectives
JI Hendry, HV Dinh, C Foster, S Gopalakrishnan, L Wang, CD Maranas
Current Opinion in Chemical Engineering 30, 17-25, 2020
22020
Cyanobacterial genome-scale carbon mapping models for genome-scale 13C-metabolic flux elucidation
S Gopalakrishnan, C Maranas
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 253, 2017
2017
Genome-scale mapping models and algorithms for stationary and instationary MFA-based metabolic flux elucidation
S Gopalakrishnan, CD Maranas
2017
A hierarchy of modeling frameworks for cyanobacterial metabolism: From gsms to ME models
T Mueller, S Gopalakrishnan, M Simons, HB Pakrasi, CD Maranas
11th Metabolic Engineering Conference 2016, 549-550, 2016
2016
Application of Metabolic Flux Analysis to Understand Metabolic Properties of Eukaryotic Systems
S Gopalakrishnan
Johns Hopkins University, 2013
2013
Metabolic Reconstruction, Analysis and Design of Metabolic Pathways
CJ Foster, D Sarkar, S Dash, S Gopalakrishnan, L Wang, J SH, CD Chan, ...
Construction of genome-scale metabolic models for non-model yeast organisms for biofuel and bioproduct engineering
SHJ Chan, H Dinh, S Gopalakrishnan, CD Maranas
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