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Bram Vrancken
Bram Vrancken
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SpreaD3: interactive visualization of spatiotemporal history and trait evolutionary processes
F Bielejec, G Baele, B Vrancken, MA Suchard, A Rambaut, P Lemey
Molecular biology and evolution 33 (8), 2167-2169, 2016
4222016
HIV persists throughout deep tissues with repopulation from multiple anatomical sources
A Chaillon, S Gianella, S Dellicour, SA Rawlings, TE Schlub, ...
The Journal of clinical investigation 130 (4), 1699-1712, 2020
1692020
HIV rebound is predominantly fueled by genetically identical viral expansions from diverse reservoirs
MA De Scheerder, B Vrancken, S Dellicour, T Schlub, E Lee, W Shao, ...
Cell host & microbe 26 (3), 347-358. e7, 2019
1442019
Measles virus and rinderpest virus divergence dated to the sixth century BCE
A Düx, S Lequime, LV Patrono, B Vrancken, S Boral, JF Gogarten, ...
Science 368 (6497), 1367-1370, 2020
1282020
Distinct effects of T-705 (favipiravir) and ribavirin on influenza virus replication and viral RNA synthesis
E Vanderlinden, B Vrancken, J Van Houdt, VK Rajwanshi, S Gillemot, ...
Antimicrobial Agents and Chemotherapy 60 (11), 6679-6691, 2016
1242016
The genealogical population dynamics of HIV-1 in a large transmission chain: bridging within and among host evolutionary rates
B Vrancken, A Rambaut, MA Suchard, A Drummond, G Baele, ...
PLoS computational biology 10 (4), e1003505, 2014
1042014
Disentangling the role of Africa in the global spread of H5 highly pathogenic avian influenza
A Fusaro, B Zecchin, B Vrancken, C Abolnik, R Ademun, A Alassane, ...
Nature communications 10 (1), 5310, 2019
792019
Host ecology determines the dispersal patterns of a plant virus
NS Trovão, G Baele, B Vrancken, F Bielejec, MA Suchard, D Fargette, ...
Virus evolution 1 (1), vev016, 2015
592015
Recent advances in computational phylodynamics
G Baele, S Dellicour, MA Suchard, P Lemey, B Vrancken
Current opinion in virology 31, 24-32, 2018
542018
Epidemiological hypothesis testing using a phylogeographic and phylodynamic framework
S Dellicour, S Lequime, B Vrancken, MS Gill, P Bastide, K Gangavarapu, ...
Nature communications 11 (1), 5620, 2020
502020
Discovery and genome characterization of three new Jeilongviruses, a lineage of paramyxoviruses characterized by their unique membrane proteins
B Vanmechelen, M Bletsa, L Laenen, AR Lopes, V Vergote, L Beller, ...
BMC genomics 19, 1-11, 2018
432018
Transmission dynamics of re-emerging rabies in domestic dogs of rural China
H Tian, Y Feng, B Vrancken, B Cazelles, H Tan, MS Gill, Q Yang, Y Li, ...
PLoS Pathogens 14 (12), e1007392, 2018
422018
Archival influenza virus genomes from Europe reveal genomic variability during the 1918 pandemic
LV Patrono, B Vrancken, M Budt, A Düx, S Lequime, S Boral, MTP Gilbert, ...
Nature communications 13 (1), 2314, 2022
39*2022
Simultaneously estimating evolutionary history and repeated traits phylogenetic signal: applications to viral and host phenotypic evolution
B Vrancken, P Lemey, A Rambaut, T Bedford, B Longdon, HF Günthard, ...
Methods in Ecology and Evolution 6 (1), 67-82, 2015
382015
Covering all bases in HIV research: unveiling a hidden world of viral evolution.
B Vrancken, S Lequime, K Theys, P Lemey
AIDS reviews 12 (2), 89-102, 2010
372010
Predicting the evolution of the Lassa virus endemic area and population at risk over the next decades
R Klitting, LE Kafetzopoulou, W Thiery, G Dudas, S Gryseels, ...
Nature communications 13 (1), 5596, 2022
352022
Contribution of epidemiological predictors in unraveling the phylogeographic history of HIV-1 subtype C in Brazil
T Gräf, B Vrancken, D Maletich Junqueira, RM de Medeiros, MA Suchard, ...
Journal of virology 89 (24), 12341-12348, 2015
352015
Genomic epidemiology of 2015–2016 Zika virus outbreak in Cape Verde
O Faye, M de Lourdes Monteiro, B Vrancken, M Prot, S Lequime, M Diarra, ...
Emerging infectious diseases 26 (6), 1084, 2020
322020
Cross-border spread, lineage displacement and evolutionary rate estimation of rabies virus in Yunnan Province, China
Y Zhang, B Vrancken, Y Feng, S Dellicour, Q Yang, W Yang, Y Zhang, ...
Virology journal 14, 1-8, 2017
292017
On the importance of negative controls in viral landscape phylogeography
S Dellicour, B Vrancken, NS Trovao, D Fargette, P Lemey
Virus Evolution 4 (2), vey023, 2018
282018
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