F Alex Wolf

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Fabian J TheisHelmholtz Munich, Technical University of MunichVerified email at helmholtz-muenchen.de
Mo LotfollahiWelcome Sanger institute,Verified email at sanger.ac.uk
Ulrich SchollwöckUniversity of MunichVerified email at lmu.de
Ian McCullochNational Tsing Hua UniversityVerified email at phys.nthu.edu.tw
Maren BüttnerSenior Data Scientist at Calico Life SciencesVerified email at calicolabs.com
Mireya PlassGroup Leader, IdibellVerified email at idibell.cat
Nikolaus RajewskyProfessor, Systems Biology, Max Delbruck Center for Molecular Medicine, BerlinVerified email at mdc-berlin.de
Jordi SolanaOxford Brookes UniversityVerified email at brookes.ac.uk
Lukas SimonBaylor College of MedicineVerified email at bcm.edu
Martin EcksteinProfessor for Physics, University of Erlangen NürnbergVerified email at fau.de
Marius LangePostdoctoral Researcher, ETH Zurich, D-BSSEVerified email at bsse.ethz.ch
Volker BergenHelmholtz & CellarityVerified email at volkerbergen.de
Stefan PeidliPostdoc, EMBL HeidelbergVerified email at embl.de
Sarah A. TeichmannWellcome Sanger Institute & University of CambridgeVerified email at cam.ac.uk
Florian BuettnerFrankfurt University/DKFZVerified email at med.uni-frankfurt.de
Laleh HaghverdiBIMSB-MDCVerified email at mdc-berlin.de
Bertie GottgensProfessor of Molecular Haematology, University of CambridgeVerified email at cam.ac.uk
Joakim DahlinKarolinska InstitutetVerified email at ki.se
Zhichao (Chichau) MiaoGuangzhou Laboratory, Guangzhou Medical UniversityVerified email at gzlab.ac.cn
Yuge JiVerified email at helmholtz-muenchen.de

F Alex Wolf

Lamin Labs

Verified email at lamin.ai - Homepage

data engineering machine learning computational biology computational physics


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
SCANPY: large-scale single-cell gene expression data analysis FA Wolf, P Angerer, FJ Theis Genome Biology 19, 15, 2018	3546	2018
Generalizing RNA velocity to transient cell states through dynamical modeling V Bergen, M Lange, S Peidli, FA Wolf†, FJ Theis† Nature Biotechnology, 2020	1277	2020
Diffusion pseudotime robustly reconstructs lineage branching L Haghverdi, M Buettner, FA Wolf, F Buettner, FJ Theis Nature Methods 13, 845-848, 2016	1034	2016
PAGA: graph abstraction reconciles clustering with trajectory inference through a topology preserving map of single cells FA Wolf, FK Hamey, M Plass, [...], N Rajewsky, L Simon, FJ Theis Genome Biology 20, 59, 2019	900	2019
Cell type atlas and lineage tree of a whole complex animal by single-cell transcriptomics M Plass, J Solana, FA Wolf, [...], FJ Theis, C Kocks, N Rajewsky Science 360 (6391), eaaq1723, 2018	417	2018
Generalized Gibbs ensemble prediction of prethermalization plateaus and their relation to nonthermal steady states in integrable systems M Kollar, FA Wolf, M Eckstein Physical Review B 84 (5), 054304, 2011	332	2011
A test metric for assessing single-cell RNA-seq batch correction M Büttner, Z Miao, FA Wolf, SA Teichmann†, FJ Theis† Nature Methods 16, 43, 2019	296	2019
scGen predicts single-cell perturbation responses M Lotfollahi, FA Wolf†, FJ Theis† Nature methods 16 (8), 715-721, 2019	245	2019
Reconstructing cell cycle and disease progression using deep learning P Eulenberg, N Koehler, T Blasi, [...], P Rees, FJ Theis†, FA Wolf† Nature Communications 8, 463, 2017	233	2017
Single cells make big data: new challenges and opportunities in transcriptomics P Angerer, L Simon, S Tritschler, FA Wolf, D Fischer, FJ Theis Current Opinion in Systems Biology 4, 85-91, 2017	189	2017
Strictly Single-Site DMRG Algorithm with Subspace Expansion C Hubig, IP McCulloch, U Schollwöck, FA Wolf Physical Review B 91 (15), 155115, 2015	158	2015
Solving nonequilibrium dynamical mean-field theory using matrix product states FA Wolf, IP McCulloch, U Schollwöck Physical Review B 90 (23), 235131, 2014	122	2014
Chebyshev matrix product state impurity solver for dynamical mean-field theory FA Wolf, IP McCulloch, O Parcollet, U Schollwöck Physical Review B 90 (11), 115124, 2014	101	2014
Imaginary-time matrix product state impurity solver for dynamical mean-field theory FA Wolf, A Go, IP McCulloch, AJ Millis, U Schollwöck Physical Review X 5 (4), 041032, 2015	95	2015
Exact real-time dynamics of the quantum Rabi model FA Wolf, M Kollar, D Braak Physical Review A 85 (5), 053817, 2012	76	2012
New theoretical approaches for correlated systems in nonequilibrium M Eckstein, A Hackl, S Kehrein, M Kollar, M Moeckel, P Werner, FA Wolf The European Physical Journal Special Topics 180, 217-235, 2009	72	2009
Dynamical correlation functions and the quantum Rabi model FA Wolf, F Vallone, G Romero, M Kollar, E Solano, D Braak Physical Review A 87 (2), 023835, 2013	68	2013
Conditional out-of-distribution generation for unpaired data using transfer VAE M Lotfollahi, M Naghipourfar, FJ Theis†, FA Wolf† Bioinformatics 36 (Supplement_2), i610-i617, 2020	66*	2020
Spectral functions and time evolution from the Chebyshev recursion FA Wolf, JA Justiniano, IP McCulloch, U Schollwöck Physical Review B 91 (11), 115144, 2015	66	2015
How to discretize a quantum bath for real-time evolution I de Vega, U Schollwöck, FA Wolf Physical Review B 92 (15), 155126, 2015	59	2015

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