| Structural characteristics of novel protein folds N Fernandez-Fuentes, JM Dybas, A Fiser PLoS computational biology 6 (4), e1000750, 2010 | 77 | 2010 |
| The HSV-1 ubiquitin ligase ICP0: Modifying the cellular proteome to promote infection MC Rodríguez, JM Dybas, J Hughes, MD Weitzman, C Boutell Virus research 285, 198015, 2020 | 64 | 2020 |
| Role of miR-2392 in driving SARS-CoV-2 infection JT McDonald, FJ Enguita, D Taylor, RJ Griffin, W Priebe, MR Emmett, ... Cell reports 37 (3), 2021 | 57 | 2021 |
| Core mitochondrial genes are down-regulated during SARS-CoV-2 infection of rodent and human hosts JW Guarnieri, JM Dybas, H Fazelinia, MS Kim, J Frere, Y Zhang, ... Science translational medicine 15 (708), eabq1533, 2023 | 49 | 2023 |
| Computational analysis and experimental validation of gene predictions in Toxoplasma gondii JM Dybas, CJ Madrid-Aliste, FY Che, E Nieves, D Rykunov, RH Angeletti, ... PLoS One 3 (12), e3899, 2008 | 41 | 2008 |
| Ndfip1 restricts mTORC1 signalling and glycolysis in regulatory T cells to prevent autoinflammatory disease AAK Layman, G Deng, CE O’Leary, S Tadros, RM Thomas, JM Dybas, ... Nature Communications 8 (1), 15677, 2017 | 40 | 2017 |
| EPIC-DB: a proteomics database for studying Apicomplexan organisms CJ Madrid-Aliste, JM Dybas, RH Angeletti, LM Weiss, K Kim, I Simon, ... BMC genomics 10, 1-7, 2009 | 31 | 2009 |
| Comparative proteomics identifies Schlafen 5 (SLFN5) as a herpes simplex virus restriction factor that suppresses viral transcription ET Kim, JM Dybas, K Kulej, ED Reyes, AM Price, LN Akhtar, A Orr, ... Nature microbiology 6 (2), 234-245, 2021 | 30 | 2021 |
| Targeted down regulation of core mitochondrial genes during SARS-CoV-2 infection JW Guarnieri, JM Dybas, H Fazelinia, MS Kim, J Frere, Y Zhang, ... BioRxiv, 2022 | 29 | 2022 |
| Ubiquitination at the interface of tumor viruses and DNA damage responses JM Dybas, C Herrmann, MD Weitzman Current opinion in virology 32, 40-47, 2018 | 27 | 2018 |
| Integrative proteomics reveals an increase in non-degradative ubiquitylation in activated CD4+ T cells JM Dybas, CE O’Leary, H Ding, LA Spruce, SH Seeholzer, PM Oliver Nature immunology 20 (6), 747-755, 2019 | 26 | 2019 |
| Adenovirus-mediated ubiquitination alters protein–RNA binding and aids viral RNA processing C Herrmann, JM Dybas, JC Liddle, AM Price, KE Hayer, R Lauman, ... Nature microbiology 5 (10), 1217-1231, 2020 | 25 | 2020 |
| Modeling proteins using a super-secondary structure library and NMR chemical shift information V Menon, BK Vallat, JM Dybas, A Fiser Structure 21 (6), 891-899, 2013 | 18 | 2013 |
| The E3 ubiquitin ligase Cul4b promotes CD4+ T cell expansion by aiding the repair of damaged DNA AA Dar, K Sawada, JM Dybas, EK Moser, EL Lewis, E Park, H Fazelinia, ... PLoS Biology 19 (2), e3001041, 2021 | 16 | 2021 |
| The E3 ubiquitin ligase Itch restricts antigen-driven B cell responses EK Moser, J Roof, JM Dybas, LA Spruce, SH Seeholzer, MP Cancro, ... Journal of Experimental Medicine 216 (9), 2170-2183, 2019 | 12 | 2019 |
| A viral biomolecular condensate coordinates assembly of progeny particles M Charman, N Grams, N Kumar, E Halko, JM Dybas, A Abbott, KK Lum, ... Nature 616 (7956), 332-338, 2023 | 10 | 2023 |
| Development of a motif‐based topology‐independent structure comparison method to identify evolutionarily related folds JM Dybas, A Fiser Proteins: Structure, Function, and Bioinformatics 84 (12), 1859-1874, 2016 | 10 | 2016 |
| Adenovirusmediated ubiquitination alters protein-RNA binding and aids viral RNA processing. Nat Microbiol 5: 1217–1231 C Herrmann, JM Dybas, JC Liddle, AM Price, KE Hayer, R Lauman, ... | 9 | 2020 |
| Adenovirus remodeling of the host proteome and host factors associated with viral genomes JM Dybas, KK Lum, K Kulej, ED Reyes, R Lauman, M Charman, ... Msystems 6 (4), 10.1128/msystems. 00468-21, 2021 | 8 | 2021 |
| The great deceiver: miR-2392’s hidden role in driving SARS-CoV-2 infection JT McDonald, FJ Enguita, D Taylor, RA Bowen, RJ Griffin, W Priebe, ... bioRxiv, 2021.04. 23.441024, 2021 | 7 | 2021 |
