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Bastian Pfeifer
Bastian Pfeifer
Medical University of Graz
Bestätigte E-Mail-Adresse bei medunigraz.at - Startseite
Titel
Zitiert von
Zitiert von
Jahr
PopGenome: an efficient Swiss army knife for population genomic analyses in R
B Pfeifer, U Wittelsbürger, SE Ramos-Onsins, MJ Lercher
Molecular biology and evolution 31 (7), 1929-1936, 2014
9522014
Towards multi-modal causability with graph neural networks enabling information fusion for explainable AI
A Holzinger, B Malle, A Saranti, B Pfeifer
Information Fusion 71, 28-37, 2021
3312021
GNN-SubNet: disease subnetwork detection with explainable graph neural networks
B Pfeifer, A Saranti, A Holzinger
Bioinformatics 38 (Supplement_2), ii120-ii126, 2022
652022
Robust random forest-based all-relevant feature ranks for trustworthy AI
B Pfeifer, A Holzinger, MG Schimek
Studies in Health Technology and Informatics 294, 137-138, 2022
392022
Estimates of introgression as a function of pairwise distances
B Pfeifer, DD Kapan
BMC bioinformatics 20, 1-11, 2019
352019
Multi-omics disease module detection with an explainable Greedy Decision Forest
B Pfeifer, H Baniecki, A Saranti, P Biecek, A Holzinger
Scientific reports 12 (1), 16857, 2022
29*2022
A hierarchical clustering and data fusion approach for disease subtype discovery
B Pfeifer, MG Schimek
Journal of Biomedical Informatics 113, 103636, 2021
272021
Actionable explainable AI (AxAI): a practical example with aggregation functions for adaptive classification and textual explanations for interpretable machine learning
A Saranti, M Hudec, E Mináriková, Z Takáč, U Großschedl, C Koch, ...
Machine Learning and Knowledge Extraction 4 (4), 924-953, 2022
262022
Generating explanations for conceptual validation of graph neural networks: An investigation of symbolic predicates learned on relevance-ranked sub-graphs
B Finzel, A Saranti, A Angerschmid, D Tafler, B Pfeifer, A Holzinger
KI-Künstliche Intelligenz 36 (3), 271-285, 2022
202022
CLARUS: An interactive explainable AI platform for manual counterfactuals in graph neural networks
JM Metsch, A Saranti, A Angerschmid, B Pfeifer, V Klemt, A Holzinger, ...
Journal of Biomedical Informatics 150, 104600, 2024
19*2024
Human-in-the-loop integration with domain-knowledge graphs for explainable federated deep learning
A Holzinger, A Saranti, AC Hauschild, J Beinecke, D Heider, R Roettger, ...
International Cross-Domain Conference for Machine Learning and Knowledge …, 2023
182023
Genome scans for selection and introgression based on k‐nearest neighbour techniques
B Pfeifer, N Alachiotis, P Pavlidis, MG Schimek
Molecular Ecology Resources 20 (6), 1597-1609, 2020
172020
Ensemble-GNN: federated ensemble learning with graph neural networks for disease module discovery and classification
B Pfeifer, H Chereda, R Martin, A Saranti, S Clemens, AC Hauschild, ...
Bioinformatics 39 (11), btad703, 2023
122023
Parea: multi-view ensemble clustering for cancer subtype discovery
B Pfeifer, MD Bloice, MG Schimek
Journal of Biomedical Informatics 143, 104406, 2023
112023
EHR problem list clustering for improved topic-space navigation
M Kreuzthaler, B Pfeifer, JA Vera Ramos, D Kramer, V Grogger, ...
BMC medical informatics and decision making 19, 107-114, 2019
102019
WhopGenome: high-speed access to whole-genome variation and sequence data in R
U Wittelsbürger, B Pfeifer, MJ Lercher
Bioinformatics 31 (3), 413-415, 2015
52015
Terminology expansion via co-occurrence analysis of large clinical real-world datasets
M Kreuzthaler, B Pfeifer, S Schulz
2022 IEEE 10th International Conference on Healthcare Informatics (ICHI), 01-02, 2022
42022
An introduction to the PopGenome package
B Pfeifer
Cran 2015, 1-18, 2020
42020
EHR Text Categorization for Enhanced Patient-Based Document Navigation
M Kreuzthaler, B Pfeifer, JA Vera Ramos, D Kramer, V Grogger, ...
Health Informatics Meets eHealth, 100-107, 2018
42018
Embedding-based terminology expansion via secondary use of large clinical real-world datasets
A Kugic, B Pfeifer, S Schulz, M Kreuzthaler
Journal of Biomedical Informatics 147, 104497, 2023
32023
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