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Jeffrey Mendenhall
Jeffrey Mendenhall
Bestätigte E-Mail-Adresse bei vanderbilt.edu
Titel
Zitiert von
Zitiert von
Jahr
Calcium-activated nonspecific cation current and synaptic depression promote network-dependent burst oscillations
JE Rubin, JA Hayes, JL Mendenhall, CA Del Negro
Proceedings of the National Academy of Sciences 106 (8), 2939-2944, 2009
1722009
BCL::Conf: small molecule conformational sampling using a knowledge based rotamer library
S Kothiwale, JL Mendenhall, J Meiler
Journal of cheminformatics 7, 1-15, 2015
1092015
Benchmarking ligand-based virtual High-Throughput Screening with the PubChem database
M Butkiewicz, EW Lowe Jr, R Mueller, JL Mendenhall, PL Teixeira, ...
Molecules 18 (1), 735-756, 2013
922013
Documentation of an imperative to improve methods for predicting membrane protein stability
BM Kroncke, AM Duran, JL Mendenhall, J Meiler, JD Blume, CR Sanders
Biochemistry 55 (36), 5002-5009, 2016
552016
Improving quantitative structure–activity relationship models using Artificial Neural Networks trained with dropout
J Mendenhall, J Meiler
Journal of computer-aided molecular design 30 (2), 177-189, 2016
552016
Identification of specific ligand–receptor interactions that govern binding and cooperativity of diverse modulators to a common metabotropic glutamate receptor 5 allosteric site
KJ Gregory, ED Nguyen, C Malosh, JL Mendenhall, JZ Zic, BS Bates, ...
ACS chemical neuroscience 5 (4), 282-295, 2014
462014
Autocorrelation descriptor improvements for QSAR: 2DA_Sign and 3DA_Sign
G Sliwoski, J Mendenhall, J Meiler
Journal of computer-aided molecular design 30, 209-217, 2016
432016
Predicting the functional impact of KCNQ1 variants of unknown significance
B Li, JL Mendenhall, BM Kroncke, KC Taylor, H Huang, DK Smith, ...
Circulation: Cardiovascular Genetics 10 (5), e001754, 2017
392017
General purpose structure-based drug discovery neural network score functions with human-interpretable pharmacophore maps
BP Brown, J Mendenhall, AR Geanes, J Meiler
Journal of chemical information and modeling 61 (2), 603-620, 2021
292021
4‐Aminopyridine‐sensitive outward currents in preBötzinger complex neurons influence respiratory rhythm generation in neonatal mice
JA Hayes, JL Mendenhall, BR Brush, CA Del Negro
The Journal of Physiology 586 (7), 1921-1936, 2008
262008
BCL:: Conf: improved open-source knowledge-based conformation sampling using the crystallography open database
J Mendenhall, BP Brown, S Kothiwale, J Meiler
Journal of chemical information and modeling 61 (1), 189-201, 2020
202020
3D deep learning for biological function prediction from physical fields
V Golkov, MJ Skwark, A Mirchev, G Dikov, AR Geanes, J Mendenhall, ...
2020 International Conference on 3D Vision (3DV), 928-937, 2020
202020
BCL:: MolAlign: three-dimensional small molecule alignment for pharmacophore mapping
BP Brown, J Mendenhall, J Meiler
Journal of chemical information and modeling 59 (2), 689-701, 2019
202019
Protein structure aids predicting functional perturbation of missense variants in SCN5A and KCNQ1
BM Kroncke, J Mendenhall, DK Smith, CR Sanders, JA Capra, AL George, ...
Computational and Structural Biotechnology Journal 17, 206-214, 2019
182019
Accurate prediction of contact numbers for multi-spanning helical membrane proteins
B Li, J Mendenhall, ED Nguyen, BE Weiner, AW Fischer, J Meiler
Journal of chemical information and modeling 56 (2), 423-434, 2016
122016
Introduction to the BioChemical Library (BCL): An application-based open-source toolkit for integrated cheminformatics and machine learning in computer-aided drug discovery
BP Brown, O Vu, AR Geanes, S Kothiwale, M Butkiewicz, EW Lowe, ...
Frontiers in pharmacology 13, 833099, 2022
112022
Improving prediction of helix–helix packing in membrane proteins using predicted contact numbers as restraints
B Li, J Mendenhall, ED Nguyen, BE Weiner, AW Fischer, J Meiler
Proteins: Structure, Function, and Bioinformatics 85 (7), 1212-1221, 2017
112017
Interfaces between alpha-helical integral membrane proteins: characterization, prediction, and docking
B Li, J Mendenhall, J Meiler
Computational and Structural Biotechnology Journal 17, 699-711, 2019
82019
A multitask deep-learning method for predicting membrane associations and secondary structures of proteins
B Li, J Mendenhall, JA Capra, J Meiler
Journal of proteome research 20 (8), 4089-4100, 2021
72021
BCL:: Mol2D—a robust atom environment descriptor for QSAR modeling and lead optimization
O Vu, J Mendenhall, D Altarawy, J Meiler
Journal of computer-aided molecular design 33, 477-486, 2019
72019
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