| CoV-Spectrum: analysis of globally shared SARS-CoV-2 data to identify and characterize new variants C Chen, S Nadeau, M Yared, P Voinov, N Xie, C Roemer, T Stadler Bioinformatics 38 (6), 1735-1737, 2022 | 204 | 2022 |
| Early detection and surveillance of SARS-CoV-2 genomic variants in wastewater using COJAC K Jahn, D Dreifuss, I Topolsky, A Kull, P Ganesanandamoorthy, ... Nature Microbiology 7 (8), 1151-1160, 2022 | 175* | 2022 |
| SARS-CoV-2 N501Y introductions and transmissions in Switzerland from beginning of October 2020 to February 2021—implementation of Swiss-wide diagnostic screening and whole … AR Goncalves Cabecinhas, T Roloff, M Stange, C Bertelli, M Huber, ... Microorganisms 9 (4), 677, 2021 | 40 | 2021 |
| Quantification of the spread of SARS-CoV-2 variant B. 1.1. 7 in Switzerland C Chen, SA Nadeau, I Topolsky, M Manceau, JS Huisman, KP Jablonski, ... Epidemics 37, 100480, 2021 | 39 | 2021 |
| Swiss public health measures associated with reduced SARS-CoV-2 transmission using genome data SA Nadeau, TG Vaughan, C Beckmann, I Topolsky, C Chen, E Hodcroft, ... Science translational medicine 15 (680), eabn7979, 2022 | 22 | 2022 |
| Advancing genomic epidemiology by addressing the bioinformatics bottleneck: Challenges, design principles, and a Swiss example C Chen, S Nadeau, I Topolsky, N Beerenwinkel, T Stadler Epidemics 39, 100576, 2022 | 4 | 2022 |
| LAPIS is a fast web API for massive open virus sequencing data C Chen, A Taepper, F Engelniederhammer, J Kellerer, C Roemer, ... BMC bioinformatics 24 (1), 232, 2023 | 2* | 2023 |
| GenSpectrum Chat: Data Exploration in Public Health Using Large Language Models C Chen, T Stadler arXiv preprint arXiv:2305.13821, 2023 | 2 | 2023 |
| Influenza transmission dynamics quantified from wastewater S Nadeau, AJ Devaux, C Bagutti, M Alt, EI Hampe, M Kraus, E Würfel, ... medRxiv, 2023.01. 23.23284894, 2023 | 2 | 2023 |
| How much should we sequence? An analysis of the Swiss SARS-CoV-2 surveillance effort F Wegner, B Cabrera-Gil, A Tanguy, C Beckmann, N Beerenwinkel, ... Microbiology spectrum, e03628-23, 2024 | | 2024 |
| Science in Real-Time–Genomic Epidemiology During the SARS-CoV-2 Pandemic C Chen ETH Zurich, 2023 | | 2023 |
| V-pipe 3.0: a sustainable pipeline for within-sample viral genetic diversity estimation L Fuhrmann, KP Jablonski, I Topolsky, AA Batavia, N Borgsmueller, ... bioRxiv, 2023.10. 16.562462, 2023 | | 2023 |
| ContextWalk: Embedding Networks with Context Information Extracted from News Articles C Chen, M Schönfeld, J Pfeffer International Conference on Database and Expert Systems Applications, 100-114, 2021 | | 2021 |
Tanja StadlerETH ZurichVerified email at env.ethz.ch
