Mireya Plass

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Eduardo EyrasEMBL Australia Group Leader, Professor - Australian National UniversityVerified email at anu.edu.au
Nikolaus RajewskyProfessor, Systems Biology, Max Delbruck Center for Molecular Medicine, BerlinVerified email at mdc-berlin.de
Javier F. CaceresMRC Human Genetics UnitVerified email at ed.ac.uk
Petar GlažarMax Delbrück Center for Molecular Medicine, Berlin, GermanyVerified email at mdc-berlin.de
Fabian J TheisHelmholtz Zentrum München, GermanyVerified email at helmholtz-muenchen.de
F. Alexander WolfLamin LabsVerified email at lamin.ai
Jordi SolanaOxford Brookes UniversityVerified email at brookes.ac.uk
Agnieszka Rybak-WolfMDCVerified email at mdc-berlin.de
Anders KroghDepartment of Computer Science and Center for Health Data Science, University of CopenhagenVerified email at di.ku.dk
Eneritz AgirreKarolinska Institutet, Molecular NeurobiologyVerified email at ki.se
Benedikt ObermayerBerlin Institute of HealthVerified email at bihealth.de
Anders RehfeldPostdoc, University of CopenhagenVerified email at sund.ku.dk
Sara R. HerasVerified email at genyo.es
Natalia GromakVerified email at path.ox.ac.uk
Ross Andrew Alex CordinerRoche Innovation Centre Copenhagen A/SVerified email at roche.com
Francisco Câmara FerreiraBioinformatics support (genome annotation)Verified email at crg.eu
Pedro G. FerreiraDepartment of Computer Science, Faculty of Sciences University of Porto; INESC-TECVerified email at fc.up.pt
Jan ChristiansenVerified email at bio.ku.dk
Jeremy SanfordProfessor of Molecular, Cellular and Developmental Biology, UC Santa Cruz Genomics Institute, CenterVerified email at ucsc.edu
Jes FrellsenAssociate Professor, Technical University of Denmark (DTU)Verified email at dtu.dk

Mireya Plass

Group Leader, Idibell

Verified email at idibell.cat - Homepage

systems biology single cell transcriptomics post-transcriptional regulation alternative polyadenylation RNA binding proteins


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The genome sequence of taurine cattle: a window to ruminant biology and evolution. S Bovine Genome, CG Elsik, RL Tellam, KC Worley, RA Gibbs, DM Muzny, ... Science 324 (5926), 522-528, 2009	1174	2009
Loss of a mammalian circular RNA locus causes miRNA deregulation and affects brain function M Piwecka, P Glažar, LR Hernandez-Miranda, S Memczak, SA Wolf, ... Science 357 (6357), eaam8526, 2017	814	2017
PAGA: graph abstraction reconciles clustering with trajectory inference through a topology preserving map of single cells FA Wolf, FK Hamey, M Plass, J Solana, JS Dahlin, B Göttgens, ... Genome Biology 20 (1), 59, 2019	620	2019
Control of alternative splicing through siRNA-mediated transcriptional gene silencing M Alló, V Buggiano, JP Fededa, E Petrillo, I Schor, M de la Mata, E Agirre, ... Nature structural & molecular biology 16 (7), 717-724, 2009	378	2009
Cell type atlas and lineage tree of a whole complex animal by single-cell transcriptomics M Plass, J Solana, FA Wolf, S Ayoub, A Misios, P Glažar, B Obermayer, ... Science 360 (6391), eaaq1723, 2018	339	2018
DGCR8 HITS-CLIP reveals novel functions for the Microprocessor S Macias, M Plass, A Stajuda, G Michlewski, E Eyras, JF Cáceres Nature Structural & Molecular Biology 19 (8), 760-766, 2012	221	2012
ASTD: the alternative splicing and transcript diversity database G Koscielny, V Le Texier, C Gopalakrishnan, V Kumanduri, JJ Riethoven, ... Genomics 93 (3), 213-220, 2009	123	2009
The Microprocessor controls the activity of mammalian retrotransposons SR Heras, S Macias, M Plass, N Fernandez, D Cano, E Eyras, ... Nature structural & molecular biology 20 (10), 1173-1181, 2013	122	2013
Deciphering 3′ ss Selection in the Yeast Genome Reveals an RNA Thermosensor that Mediates Alternative Splicing M Meyer, M Plass, J Pérez-Valle, E Eyras, J Vilardell Molecular Cell 43 (6), 1033-1039, 2011	109	2011
Drosha Regulates Gene Expression Independently of RNA Cleavage Function N Gromak, M Dienstbier, S Macias, M Plass, E Eyras, JF Cáceres, ... Cell reports 5 (6), 1499-1510, 2013	74	2013
DGCR8 Acts as an Adaptor for the Exosome Complex to Degrade Double-Stranded Structured RNAs S Macias, RA Cordiner, P Gautier, M Plass, JF Cáceres Molecular Cell 60 (6), 873-885, 2015	69	2015
Co-evolution of the branch site and SR proteins in eukaryotes M Plass, E Agirre, D Reyes, F Camara, E Eyras Trends in Genetics 24 (12), 590-594, 2008	47	2008
Highly accessible AU-rich regions in 3’untranslated regions are hotspots for binding of regulatory factors. M Plass, SH Rasmussen, A Krogh PLoS Computational Biology 13 (4), 2017	44	2017
Alterations in polyadenylation and its implications for endocrine disease A Rehfeld, M Plass, A Krogh, L Friis-Hansen Frontiers in endocrinology 4, 53, 2013	42	2013
RNA secondary structure mediates alternative 3′ ss selection in Saccharomyces cerevisiae M Plass, C Codony-Servat, PG Ferreira, J Vilardell, E Eyras RNA 18 (6), 1103-1115, 2012	41	2012
Drosophila Imp iCLIP identifies an RNA assemblage coordinating F-actin formation HT Hansen, SH Rasmussen, SK Adolph, M Plass, A Krogh, J Sanford, ... Genome biology 16 (1), 1-16, 2015	38	2015
Differentiated evolutionary rates in alternative exons and the implications for splicing regulation M Plass, E Eyras BMC evolutionary biology 6 (1), 50, 2006	34	2006
Alternative poladenylation of tumor suppressor genes in small intestinal neuroendocrine tumors A Rehfeld, M Plass, K Døssing, U Knigge, A Kjaer, A Krogh, ... Frontiers in endocrinology 5, 46, 2014	30	2014
On the Accuracy of Short Read Mapping P Menzel, J Frellsen, M Plass, SH Rasmussen, A Krogh Deep Sequencing Data Analysis, 39-59, 2013	11	2013
RNA Dynamics in Alzheimer’s Disease A Rybak-Wolf, M Plass Molecules 26 (17), 5113, 2021	6	2021

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