Nicholas Ingolia
Nicholas Ingolia
Assistant Professor, UC Berkeley
Verified email at berkeley.edu - Homepage
TitleCited byYear
Mammalian microRNAs predominantly act to decrease target mRNA levels
H Guo, NT Ingolia, JS Weissman, DP Bartel
Nature 466 (7308), 835, 2010
35152010
Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling
NT Ingolia, S Ghaemmaghami, JRS Newman, JS Weissman
science 324 (5924), 218-223, 2009
23842009
Ribosome profiling of mouse embryonic stem cells reveals the complexity and dynamics of mammalian proteomes
NT Ingolia, LF Lareau, JS Weissman
Cell 147 (4), 789-802, 2011
14422011
The translational landscape of mTOR signalling steers cancer initiation and metastasis
AC Hsieh, Y Liu, MP Edlind, NT Ingolia, MR Janes, A Sher, EY Shi, ...
Nature 485 (7396), 55, 2012
9052012
The ribosome profiling strategy for monitoring translation in vivo by deep sequencing of ribosome-protected mRNA fragments
NT Ingolia, GA Brar, S Rouskin, AM McGeachy, JS Weissman
Nature protocols 7 (8), 1534, 2012
6902012
Ribosome profiling provides evidence that large noncoding RNAs do not encode proteins
M Guttman, P Russell, NT Ingolia, JS Weissman, ES Lander
Cell 154 (1), 240-251, 2013
5062013
Ribosome profiling: new views of translation, from single codons to genome scale
NT Ingolia
Nature Reviews Genetics 15 (3), 205-213, 2014
4642014
Decoding human cytomegalovirus
N Stern-Ginossar, B Weisburd, A Michalski, VTK Le, MY Hein, SX Huang, ...
Science 338 (6110), 1088-1093, 2012
4352012
High-resolution view of the yeast meiotic program revealed by ribosome profiling
GA Brar, M Yassour, N Friedman, A Regev, NT Ingolia, JS Weissman
Science 335 (6068), 552-557, 2012
3812012
Ribosome profiling reveals pervasive translation outside of annotated protein-coding genes
NT Ingolia, GA Brar, N Stern-Ginossar, MS Harris, GJS Talhouarne, ...
Cell reports 8 (5), 1365-1379, 2014
3662014
Molecular basis of infrared detection by snakes
EO Gracheva, NT Ingolia, YM Kelly, JF Cordero-Morales, G Hollopeter, ...
Nature 464 (7291), 1006, 2010
2982010
Identification of long-lived proteins reveals exceptional stability of essential cellular structures
BH Toyama, JN Savas, SK Park, MS Harris, NT Ingolia, JR Yates III, ...
Cell 154 (5), 971-982, 2013
2692013
The small molecule ISRIB reverses the effects of eIF2α phosphorylation on translation and stress granule assembly
C Sidrauski, AM McGeachy, NT Ingolia, P Walter
Elife 4, e05033, 2015
2182015
Topology and robustness in the Drosophila segment polarity network
NT Ingolia
PLoS biology 2 (6), e123, 2004
1922004
Ribosome footprint profiling of translation throughout the genome
NT Ingolia
Cell 165 (1), 22-33, 2016
1892016
Causal signals between codon bias, mRNA structure, and the efficiency of translation and elongation
C Pop, S Rouskin, NT Ingolia, L Han, EM Phizicky, JS Weissman, D Koller
Molecular systems biology 10 (12), 2014
1862014
Observation of dually decoded regions of the human genome using ribosome profiling data
AM Michel, KR Choudhury, AE Firth, NT Ingolia, JF Atkins, PV Baranov
Genome research 22 (11), 2219-2229, 2012
1672012
Genome-wide translational profiling by ribosome footprinting
NT Ingolia
Methods in enzymology 470, 119-142, 2010
1582010
PtdIns4P synthesis by PI4KIIIα at the plasma membrane and its impact on plasma membrane identity
F Nakatsu, JM Baskin, J Chung, LB Tanner, G Shui, SY Lee, M Pirruccello, ...
J Cell Biol 199 (6), 1003-1016, 2012
1562012
Ganglion-specific splicing of TRPV1 underlies infrared sensation in vampire bats
EO Gracheva, JF Cordero-Morales, JA González-Carcacía, NT Ingolia, ...
Nature 476 (7358), 88-91, 2011
1462011
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Articles 1–20