Dissecting the stochastic transcription initiation process in live Escherichia coli J Lloyd-Price, S Startceva, V Kandavalli, JG Chandraseelan, N Goncalves, ... DNA Research 23 (3), 203-214, 2016 | 39 | 2016 |
In vivo single-molecule kinetics of activation and subsequent activity of the arabinose promoter J Mäkelä, M Kandhavelu, SMD Oliveira, JG Chandraseelan, J Lloyd-Price, ... Nucleic acids research 41 (13), 6544-6552, 2013 | 35 | 2013 |
In vivo kinetics of segregation and polar retention of MS2-GFP-RNA complexes in Escherichia coli A Gupta, J Lloyd-Price, R Neeli-Venkata, SMD Oliveira, AS Ribeiro Biophysical journal 106 (9), 1928-1937, 2014 | 34 | 2014 |
Kinetics of the cellular intake of a gene expression inducer at high concentrations H Tran, SMD Oliveira, N Goncalves, AS Ribeiro Molecular BioSystems 11 (9), 2579-2587, 2015 | 24 | 2015 |
Temperature-Dependent Model of Multi-step Transcription Initiation in Escherichia coli Based on Live Single-Cell Measurements SMD Oliveira, A Häkkinen, J Lloyd-Price, H Tran, V Kandavalli, ... PLoS computational biology 12 (10), e1005174, 2016 | 21 | 2016 |
Increased cytoplasm viscosity hampers aggregate polar segregation in Escherichia coli SMD Oliveira, R Neeli‐Venkata, NSM Goncalves, JA Santinha, L Martins, ... Molecular Microbiology 99 (4), 686-699, 2016 | 21 | 2016 |
Robustness of the division symmetry in Escherichia coli and functional consequences of symmetry breaking A Gupta, J Lloyd-Price, SMD Oliveira, O Yli-Harja, AB Muthukrishnan, ... Physical biology 11 (6), 066005, 2014 | 16 | 2014 |
Effects of temperature on the dynamics of the LacI-TetR-CI repressilator JG Chandraseelan, SMD Oliveira, A Häkkinen, H Tran, I Potapov, A Sala, ... Molecular BioSystems 9 (12), 3117-3123, 2013 | 10 | 2013 |
Temperature-dependence of the single-cell variability in the kinetics of transcription activation in Escherichia coli NSM Goncalves, S Startceva, CSD Palma, MNM Bahrudeen, ... Physical biology 15 (2), 026007, 2018 | 6 | 2018 |
Single-cell kinetics of a repressilator when implemented in a single-copy plasmid SMD Oliveira, JG Chandraseelan, A Häkkinen, NSM Goncalves, ... Molecular BioSystems 11 (7), 1939-1945, 2015 | 6 | 2015 |
Incidental inflammatory adenoma with β‐catenin activation in the setting of paediatric NASH S Oliveira, AK Samba, AJ Towbin, A Gupta, JI Geller, JD Nathan, R Kohli Pediatric obesity 13 (1), 70-73, 2018 | 5 | 2018 |
SCIP: a single-cell image processor toolbox L Martins, R Neeli-Venkata, SMD Oliveira, A Häkkinen, AS Ribeiro, ... Bioinformatics 34 (24), 4318-4320, 2018 | 4 | 2018 |
iCellFusion: Tool for Fusion and Analysis of Live-Cell Images from Time-Lapse Multimodal Microscopy J Santinha, L Martins, A Häkkinen, J Lloyd-Price, SMD Oliveira, A Gupta, ... Biomedical Image Analysis and Mining Techniques for Improved Health Outcomes …, 2016 | 4 | 2016 |
A strategy for dissecting the kinetics of transcription repression mechanisms CSD Palma, S Startceva, R Neeli-Venkata, M Zare, NSM Goncalves, ... EMBEC & NBC 2017, 1097-1100, 2017 | 3 | 2017 |
Estimating RNA numbers in single cells by RNA fluorescent tagging and flow cytometry MNM Bahrudeen, V Chauhan, CSD Palma, SMD Oliveira, VK Kandavalli, ... Journal of microbiological methods 166, 105745, 2019 | 2 | 2019 |
Chromosome and plasmid-borne P LacO3O1 promoters differ in sensitivity to critically low temperatures SMD Oliveira, NSM Goncalves, VK Kandavalli, L Martins, ... Scientific reports 9 (1), 1-15, 2019 | 2 | 2019 |
The precision of the symmetry in Z-ring placement in Escherichia coli is hampered at critical temperatures R Neeli-Venkata, SMD Oliveira, L Martins, S Startceva, M Bahrudeen, ... Physical biology 15 (5), 056002, 2018 | 2 | 2018 |
Estimating effects of extrinsic noise on model genes and circuits with empirically validated kinetics SMD Oliveira, MNM Bahrudeen, S Startceva, AS Ribeiro Italian Workshop on Artificial Life and Evolutionary Computation, 181-193, 2017 | 2 | 2017 |
In vivo single-molecule dynamics of transcription of the viral T7 Phi 10 promoter in Escherichia coli NSM Goncalves, H Tran, SMD Oliveira, R Neeli-Venkata, AS Ribeiro, ... BIOTECHNO 2016, 17, 2016 | 2 | 2016 |
Transcription closed and open complex formation coordinate expression of genes with a shared promoter region A Häkkinen, SMD Oliveira, R Neeli-Venkata, AS Ribeiro Journal of the Royal Society Interface 16 (161), 20190507, 2019 | 1 | 2019 |