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Nicholas Van Wittenberghe
Nicholas Van Wittenberghe
Broad Institute
Bestätigte E-Mail-Adresse bei broadinstitute.org
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Zitiert von
Zitiert von
Jahr
Genetic effects on gene expression across human tissues
GTEx Consortium Lead analysts: Aguet François 1 Brown Andrew A. 2 3 4 Castel ...
Nature 550 (7675), 204-213, 2017
32932017
m6A-LAIC-seq reveals the census and complexity of the m6A epitranscriptome
B Molinie, J Wang, KS Lim, R Hillebrand, Z Lu, N Van Wittenberghe, ...
Nature methods 13 (8), 692-698, 2016
3572016
Genome-wide maps of m6A circRNAs identify widespread and cell-type-specific methylation patterns that are distinct from mRNAs
C Zhou, B Molinie, K Daneshvar, JV Pondick, J Wang, ...
Cell reports 20 (9), 2262-2276, 2017
3522017
The human and mouse enteric nervous system at single-cell resolution
E Drokhlyansky, CS Smillie, N Van Wittenberghe, M Ericsson, GK Griffin, ...
Cell 182 (6), 1606-1622. e23, 2020
3412020
Single-nucleus cross-tissue molecular reference maps toward understanding disease gene function
G Eraslan, E Drokhlyansky, S Anand, E Fiskin, A Subramanian, M Slyper, ...
Science 376 (6594), eabl4290, 2022
2162022
Co-expression networks reveal the tissue-specific regulation of transcription and splicing
A Saha, Y Kim, ADH Gewirtz, B Jo, C Gao, IC McDowell, BE Engelhardt, ...
Genome research 27 (11), 1843-1858, 2017
1662017
Single-nucleus and spatial transcriptome profiling of pancreatic cancer identifies multicellular dynamics associated with neoadjuvant treatment
WL Hwang, KA Jagadeesh, JA Guo, HI Hoffman, P Yadollahpour, ...
Nature genetics 54 (8), 1178-1191, 2022
1422022
Nuclei multiplexing with barcoded antibodies for single-nucleus genomics
JT Gaublomme, B Li, C McCabe, A Knecht, Y Yang, E Drokhlyansky, ...
Nature communications 10 (1), 2907, 2019
1392019
Identifying cis-mediators for trans-eQTLs across many human tissues using genomic mediation analysis
F Yang, J Wang, BL Pierce, LS Chen, F Aguet, KG Ardlie, BB Cummings, ...
Genome research 27 (11), 1859-1871, 2017
672017
Local genetic effects on gene expression across 44 human tissues
F Aguet, AA Brown, SE Castel, JR Davis, P Mohammadi, AV Segre, ...
BioRxiv, 074450, 2016
642016
Single-nucleus and spatial transcriptomics of archival pancreatic cancer reveals multi-compartment reprogramming after neoadjuvant treatment
WL Hwang, KA Jagadeesh, JA Guo, HI Hoffman, P Yadollahpour, ...
BioRxiv, 2020.08. 25.267336, 2020
372020
Genetic effects on gene expression across human tissues
DA Laboratory, NIHC Fund, BCS Site—NDRI, BCS Site—RPCI, ...
Nature 550 (7675), 204-213, 2017
232017
The enteric nervous system of the human and mouse colon at a single-cell resolution
E Drokhlyansky, CS Smillie, N Van Wittenberghe, M Ericsson, GK Griffin, ...
BioRxiv, 746743, 2019
212019
Assessment of spatial transcriptomics for oncology discovery
A Lyubetskaya, B Rabe, A Fisher, A Lewin, I Neuhaus, C Brett, T Brett, ...
Cell Reports Methods 2 (11), 2022
102022
SnFFPE-Seq: Towards scalable single nucleus RNA-Seq of formalin-fixed paraffin-embedded (FFPE) tissue
H Chung, A Melnikov, C McCabe, E Drokhlyansky, N Van Wittenberghe, ...
bioRxiv, 2022.08. 25.505257, 2022
72022
Multitissue H3K27ac profiling of GTEx samples links epigenomic variation to disease
L Hou, X Xiong, Y Park, C Boix, B James, N Sun, L He, A Patel, Z Zhang, ...
Nature Genetics 55 (10), 1665-1676, 2023
42023
Identification and characterization of m6A circular RNA epitranscriptomes
C Zhou, B Molinie, K Daneshvar, JV Pondick, J Wang, ...
bioRxiv, 115899, 2017
42017
Single-nucleus RNA-seq and Spatial Transcriptomics of Archival Primary Pancreatic Ductal Adenocarcinoma Uncovers Multi-compartment Intratumoral Heterogeneity Associated with …
W Hwang, K Jagadeesh, JA Guo, HI Hoffman, O Ashenberg, ...
International Journal of Radiation Oncology, Biology, Physics 108 (3), S48-S49, 2020
12020
HTAPP TST-Nuclei isolation from frozen tissue v2
E Drokhlyansky, N Van, M Slyper, J Waldman, A Segerstolpe, ...
ZappyLab, Inc. Title of the publication associated with this dataset …, 2020
12020
Tissue and cellular spatiotemporal dynamics in colon aging
AC Daly, F Cambuli, T Aijo, B Lotstedt, N Marjanovic, O Kuksenko, ...
bioRxiv, 2024.04. 22.590125, 2024
2024
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