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Thiruvarangan Ramaraj, PhD
Thiruvarangan Ramaraj, PhD
Assistant Professor, School of Computing, College of Computing and Digital Media, DePaul University
Bestätigte E-Mail-Adresse bei depaul.edu - Startseite
Titel
Zitiert von
Zitiert von
Jahr
Genome, epigenome and RNA sequences of monozygotic twins discordant for multiple sclerosis
SE Baranzini, J Mudge, JC Van Velkinburgh, P Khankhanian, ...
Nature 464 (7293), 1351-1356, 2010
5602010
Composition, diversity and abundance of gut microbiome in prediabetes and type 2 diabetes
SM Lambeth, T Carson, J Lowe, T Ramaraj, JW Leff, L Luo, CJ Bell, ...
Journal of diabetes and obesity 2 (3), 1, 2015
2962015
Antigen–antibody interface properties: Composition, residue interactions, and features of 53 non-redundant structures
T Ramaraj, T Angel, EA Dratz, AJ Jesaitis, B Mumey
Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics 1824 (3), 520-532, 2012
2002012
Genome and secretome analysis of the hemibiotrophic fungal pathogen, Moniliophthora roreri, which causes frosty pod rot disease of cacao: mechanisms of the …
LW Meinhardt, GGL Costa, DPT Thomazella, PJPL Teixeira, ...
BMC genomics 15, 1-25, 2014
1262014
The amaranth genome: genome, transcriptome, and physical map assembly
JW Clouse, D Adhikary, JT Page, T Ramaraj, MK Deyholos, JA Udall, ...
The Plant Genome 9 (1), plantgenome2015.07.0062, 2016
1202016
Single-molecule sequencing and Hi-C-based proximity-guided assembly of amaranth (Amaranthus hypochondriacus) chromosomes provide insights into genome …
DJ Lightfoot, DE Jarvis, T Ramaraj, R Lee, EN Jellen, PJ Maughan
BMC biology 15, 1-15, 2017
1182017
Exploring structural variation and gene family architecture with De Novo assemblies of 15 Medicago genomes
P Zhou, KAT Silverstein, T Ramaraj, J Guhlin, R Denny, J Liu, AD Farmer, ...
BMC genomics 18, 1-14, 2017
1122017
Genome and evolution of the arbuscular mycorrhizal fungus Diversispora epigaea (formerly Glomus versiforme) and its bacterial endosymbionts
X Sun, W Chen, S Ivanov, AM MacLean, H Wight, T Ramaraj, J Mudge, ...
New Phytologist 221 (3), 1556-1573, 2019
922019
De Novo Genome Sequence Assemblies of Gossypium raimondii and Gossypium turneri
JA Udall, E Long, C Hanson, D Yuan, T Ramaraj, JL Conover, L Gong, ...
G3: Genes, Genomes, Genetics 9 (10), 3079-3085, 2019
742019
Strategies for optimizing BioNano and Dovetail explored through a second reference quality assembly for the legume model, Medicago truncatula
KM Moll, P Zhou, T Ramaraj, D Fajardo, NP Devitt, MJ Sadowsky, ...
BMC genomics 18, 1-16, 2017
682017
Hybrid assembly with long and short reads improves discovery of gene family expansions
JR Miller, P Zhou, J Mudge, J Gurtowski, H Lee, T Ramaraj, BP Walenz, ...
BMC genomics 18, 1-12, 2017
642017
Novel meiotic miRNAs and indications for a role of phasiRNAs in meiosis
S Dukowic-Schulze, A Sundararajan, T Ramaraj, S Kianian, ...
Frontiers in Plant Science 7, 204109, 2016
622016
Use of a draft genome of coffee (Coffea arabica) to identify SNPs associated with caffeine content
HTM Tran, T Ramaraj, A Furtado, LS Lee, RJ Henry
Plant biotechnology journal 16 (10), 1756-1766, 2018
592018
Crude oil impairs immune function and increases susceptibility to pathogenic bacteria in southern flounder
KM Bayha, N Ortell, CN Ryan, KJ Griffitt, M Krasnec, J Sena, T Ramaraj, ...
PloS one 12 (5), e0176559, 2017
572017
The complete chloroplast genome sequences for four Amaranthus species (Amaranthaceae)
L Chaney, R Mangelson, T Ramaraj, EN Jellen, PJ Maughan
Applications in Plant Sciences 4 (9), 1600063, 2016
562016
The transcriptome landscape of early maize meiosis
S Dukowic-Schulze, A Sundararajan, J Mudge, T Ramaraj, AD Farmer, ...
BMC plant biology 14, 1-15, 2014
532014
Comparative genomic analysis of two Burkholderia glumae strains from different geographic origins reveals a high degree of plasticity in genome structure …
F Francis, J Kim, T Ramaraj, A Farmer, MC Rush, JH Ham
Molecular genetics and genomics 288, 195-203, 2013
532013
The genome sequence of Gossypioides kirkii illustrates a descending dysploidy in plants
JA Udall, E Long, T Ramaraj, JL Conover, D Yuan, CE Grover, L Gong, ...
Frontiers in plant science 10, 472622, 2019
402019
Characterization, correction and de novo assembly of an Oxford Nanopore genomic dataset from Agrobacterium tumefaciens
S Deschamps, J Mudge, C Cameron, T Ramaraj, A Anand, K Fengler, ...
Scientific reports 6 (1), 28625, 2016
392016
Salt and oxidative stresses uniquely regulate tomato cytokinin levels and transcriptomic response
EA Keshishian, HT Hallmark, T Ramaraj, L Plačková, A Sundararajan, ...
Plant Direct 2 (7), e00071, 2018
352018
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