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Ananth Kalyanaraman
Ananth Kalyanaraman
Washington State University, Pacific Northwest National Laboratory
Bestätigte E-Mail-Adresse bei wsu.edu - Startseite
Titel
Zitiert von
Zitiert von
Jahr
The B73 maize genome: complexity, diversity, and dynamics
PS Schnable, D Ware, RS Fulton, JC Stein, F Wei, S Pasternak, C Liang, ...
science 326 (5956), 1112, 2009
40032009
The genome of the domesticated apple (Malus× domestica Borkh.)
R Velasco, A Zharkikh, J Affourtit, A Dhingra, A Cestaro, A Kalyanaraman, ...
Nature genetics 42 (10), 833-839, 2010
20992010
Genome sequencing and analysis of the model grass Brachypodium distachyon
J Vogel, D Garvin, TC Mockler, J Schmutz, D Rokhsar, M Bevan
17242010
Parallel heuristics for scalable community detection
H Lu, M Halappanavar, A Kalyanaraman
Parallel Computing 47, 19-37, 2015
1692015
Efficient clustering of large EST data sets on parallel computers
A Kalyanaraman, S Aluru, S Kothari, V Brendel
Nucleic Acids Research 31 (11), 2963-2974, 2003
1122003
Network-on-chip hardware accelerators for biological sequence alignment
S Sarkar, GR Kulkarni, PP Pande, A Kalyanaraman
Computers, IEEE Transactions on 59 (1), 29-41, 2010
782010
Efficient algorithms and software for detection of full-length LTR retrotransposons
A Kalyanaraman, S Aluru
Computational Systems Bioinformatics Conference, 2005. Proceedings. 2005 …, 2005
622005
Hardware accelerators for biocomputing: A survey
S Sarkar, T Majumder, A Kalyanaraman, PP Pande
Proceedings of 2010 IEEE International Symposium on Circuits and Systems …, 2010
612010
Distributed louvain algorithm for graph community detection
S Ghosh, M Halappanavar, A Tumeo, A Kalyanaraman, H Lu, ...
2018 IEEE international parallel and distributed processing symposium (IPDPS …, 2018
602018
Space and time efficient parallel algorithms and software for EST clustering
A Kalyanaraman, S Aluru, V Brendel, S Kothari
IEEE Transactions on parallel and distributed systems 14 (12), 1209-1221, 2003
582003
Detailed analysis of a contiguous 22-Mb region of the maize genome
F Wei, JC Stein, C Liang, J Zhang, RS Fulton, RS Baucom, E De Paoli, ...
PloS Genetics 5 (11), e1000728, 2009
542009
A survey of SL1-spliced transcripts from the root-lesion nematode Pratylenchus penetrans
M Mitreva, AA Elling, M Dante, AP Kloek, A Kalyanaraman, S Aluru, ...
Molecular Genetics and Genomics 272 (2), 138-148, 2004
492004
Attenuation of virulence in an apicomplexan hemoparasite results in reduced genome diversity at the population level
A Lau, A Kalyanaraman, I Echaide, G Palmer, R Bock, M Pedroni, ...
BMC genomics 12 (1), 410, 2011
432011
Assembling genomes on large-scale parallel computers
A Kalyanaraman, SJ Emrich, PS Schnable, S Aluru
Proceedings 20th IEEE International Parallel & Distributed Processing …, 2006
432006
Efficient detection of communities in biological bipartite networks
P Pesántez-Cabrera, A Kalyanaraman
IEEE/ACM transactions on computational biology and bioinformatics 16 (1 …, 2017
37*2017
BioEarth: Envisioning and developing a new regional earth system model to inform natural and agricultural resource management
JC Adam, JC Stephens, SH Chung, MP Brady, RD Evans, CE Kruger, ...
Climatic Change 129 (3), 555-571, 2015
372015
pGraph: Efficient Parallel Construction of Large-Scale Protein Sequence Homology Graphs
C Wu, A Kalyanaraman, WR Cannon
37*
Algorithms for balanced graph colorings with applications in parallel computing
H Lu, M Halappanavar, D Chavarria-Miranda, AH Gebremedhin, ...
IEEE Transactions on Parallel and Distributed Systems 28 (5), 1240-1256, 2016
36*2016
MapReduce implementation of a hybrid spectral library-database search method for large-scale peptide identification
A Kalyanaraman, WR Cannon, B Latt, DJ Baxter
Bioinformatics 27 (21), 3072-3073, 2011
312011
Scalable static and dynamic community detection using grappolo
M Halappanavar, H Lu, A Kalyanaraman, A Tumeo
2017 IEEE High Performance Extreme Computing Conference (HPEC), 1-6, 2017
302017
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