Bas E. Dutilh

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Martijn HuynenCMBI, Radboud University Medical CentreVerified email at cmbi.ru.nl
Rob EdwardsMatthew Flinders Fellow of Bioinformatics, Flinders University, Adelaide, SA, AustraliaVerified email at flinders.edu.au
Genivaldo Gueiros Z. SilvaSan Diego State UniversityVerified email at rohan.sdsu.edu
prof dr ir Mike S.M. JettenRadboud University Nijmegen, Microbiology, TU Delft, anammox, NetherlandsVerified email at science.ru.nl
Andrew M. KropinskiUniversity of GuelphVerified email at uoguelph.ca
Fabiano ThompsonFederal University of Rio de Janeiro (UFRJ)Verified email at biologia.ufrj.br
Mart KrupovicInstitut PasteurVerified email at pasteur.fr
Prof. Dr. Huub J.M. Op den CampRadboud University Nijmegen, Department of MicrobiologyVerified email at science.ru.nl
Felipe Hernandes CoutinhoInstituto de Ciencias del Mar CSICVerified email at icm.csic.es
Marc StrousUniversity of CalgaryVerified email at ucalgary.ca
Harold TjalsmaMolecular Biologist @ Radboud University Nijmegen Medical CentreVerified email at labgk.umcn.nl
Hans J.C.T. WesselsProteomics scientist, Radboud Proteomics Centre, Radboud University Nijmegen Medical CentreVerified email at labgk.umcn.nl
Matthew B SullivanProfessor, Ohio State University, Microbiology and Civil, Env'l and Geodetic Engin'gVerified email at osu.edu
Liz DinsdaleMatthew Flinders Fellow of Marine Biology, Professor, Flinders University, South AustraliaVerified email at flinders.edu.au
Berend SnelUtrecht UniversityVerified email at uu.nl
Daan R. SpethPostdoc, Orphan Lab, CaltechVerified email at caltech.edu
John MokiliSan Diego State UniversityVerified email at mail.sdsu.edu
Rob LavigneProfessor, Laboratory of Gene Technology, University of LeuvenVerified email at kuleuven.be
Forest RohwerSan Diego State UniversityVerified email at mail.sdsu.edu
Ramy K. AzizProfessor of Microbiology & Immunology, CCHE 57357 & Faculty of Pharmacy, Cairo UniversityVerified email at pharma.cu.edu.eg

Bas E. Dutilh

Theoretical Biology and Bioinformatics, Utrecht University

Verified email at uu.nl - Homepage

Metagenomics Genome evolution Virus discovery Microbial ecology Comparative metagenomics


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Nitrite-driven anaerobic methane oxidation by oxygenic bacteria KF Ettwig, MK Butler, D Le Paslier, E Pelletier, S Mangenot, ... Nature 464 (7288), 543-548, 2010	1371*	2010
Deciphering the evolution and metabolism of an anammox bacterium from a community genome M Strous, E Pelletier, S Mangenot, T Rattei, A Lehner, MW Taylor, M Horn, ... Nature 440 (7085), 790-794, 2006	1124*	2006
A bacterial driver–passenger model for colorectal cancer: beyond the usual suspects H Tjalsma, A Boleij, JR Marchesi, BE Dutilh Nature Reviews Microbiology 10 (8), 575-582, 2012	544	2012
Metagenomics and future perspectives in virus discovery JL Mokili, F Rohwer, BE Dutilh Current Opinion in Virology 2 (1), 63-77, 2012	519	2012
Towards the human colorectal cancer microbiome JR Marchesi, BE Dutilh, N Hall, WH Peters, R Roelofs, A Boleij, H Tjalsma PLoS One 6 (5), e20447, 2011	500	2011
A highly abundant bacteriophage discovered in the unknown sequences of human faecal metagenomes BE Dutilh, N Cassman, K McNair, SE Sanchez, GGZ Silva, L Boling, ... Nature Communications 5, 2014	456	2014
Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses S Roux, JR Brum, BE Dutilh, S Sunagawa, MB Duhaime, A Loy, ... Nature 537 (7622), 689-693, 2016	379	2016
The metagenome of the marine anammox bacterium ‘Candidatus Scalindua profunda’ illustrates the versatility of this globally important nitrogen cycle bacterium J van de Vossenberg, D Woebken, WJ Maalcke, HJCT Wessels, BE Dutilh, ... Environmental Microbiology 15 (5), 1275-1289, 2013	249*	2013
Computational approaches to predict bacteriophage–host relationships RA Edwards, K McNair, K Faust, J Raes, BE Dutilh FEMS microbiology reviews 40 (2), 258-272, 2016	220	2016
Genome-based microbial ecology of anammox granules in a full-scale wastewater treatment system DR Speth, MH in ’t Zandt, S Guerrero-Cruz, BE Dutilh, MSM Jetten Nature communications 7, 11172, 2016	210	2016
Genome trees and the nature of genome evolution B Snel, MA Huynen, BE Dutilh Annual Review of Microbiology 59, 191-209, 2005	206	2005
Changes to taxonomy and the International Code of Virus Classification and Nomenclature ratified by the International Committee on Taxonomy of Viruses (2018) AMQ King, EJ Lefkowitz, AR Mushegian, MJ Adams, BE Dutilh, ... Archives of virology 163 (9), 2601-2631, 2018	195	2018
Marine viral macro-and micro-diversity from pole to pole AC Gregory, AA Zayed, N Conceição-Neto, B Temperton, B Bolduc, ... Cell 177 (5), 1109-1123.e14, 2019	176	2019
Computational pan-genomics: status, promises and challenges Briefings in Bioinformatics 19 (1), 118–135, 2018	172	2018
Eleven grand challenges in single-cell data science D Lähnemann, J Köster, E Szczurek, DJ McCarthy, SC Hicks, ... Genome biology 21 (1), 1-35, 2020	167	2020
Pyrosequencing of 16S rRNA gene amplicons to study the microbiota in the gastrointestinal tract of carp (Cyprinus carpio L.) MAHJ van Kessel, BE Dutilh, K Neveling, MP Kwint, JA Veltman, G Flik, ... Amb Express 1 (1), 1-9, 2011	161	2011
Discovery of a HapE mutation that causes azole resistance in Aspergillus fumigatus through whole genome sequencing and sexual crossing SMT Camps, BE Dutilh, MC Arendrup, AJMM Rijs, E Snelders, ... PLoS One 7 (11), e50034, 2012	159	2012
Genome-wide profiling of p63 DNA-binding sites identifies an element that regulates gene expression during limb development in the 7q21 SHFM1 locus EN Kouwenhoven, SJ Van Heeringen, JJ Tena, M Oti, BE Dutilh, ... PLoS Genetics 6 (8), e1001065-e1001065, 2010	157	2010
Horizontal gene transfer from Bacteria to rumen Ciliates indicates adaptation to their anaerobic, carbohydrates-rich environment G Ricard, NR McEwan, BE Dutilh, JP Jouany, D Macheboeuf, M Mitsumori, ... BMC Genomics 7 (1), 22, 2006	157	2006
Changes to virus taxonomy and the International Code of Virus Classification and Nomenclature ratified by the International Committee on Taxonomy of Viruses (2019) PJ Walker, SG Siddell, EJ Lefkowitz, AR Mushegian, DM Dempsey, ... Archives of virology 164 (9), 2417-2429, 2019	126	2019

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