Folgen
Carson Andorf
Carson Andorf
Computational Biologist, USDA-ARS
Bestätigte E-Mail-Adresse bei iastate.edu
Titel
Zitiert von
Zitiert von
Jahr
De novo assembly, annotation, and comparative analysis of 26 diverse maize genomes
MB Hufford, AS Seetharam, MR Woodhouse, KM Chougule, S Ou, J Liu, ...
Science 373 (6555), 655-662, 2021
3072021
MaizeGDB 2018: the maize multi-genome genetics and genomics database
JL Portwood, MR Woodhouse, EK Cannon, JM Gardiner, LC Harper, ...
Nucleic acids research 47 (D1), D1146-D1154, 2019
2622019
MaizeGDB update: new tools, data and interface for the maize model organism database
CM Andorf, EK Cannon, JL Portwood, JM Gardiner, LC Harper, ...
Nucleic acids research 44 (D1), D1195-D1201, 2016
2102016
The maize W22 genome provides a foundation for functional genomics and transposon biology
NM Springer, SN Anderson, CM Andorf, KR Ahern, F Bai, O Barad, ...
Nature genetics 50 (9), 1282-1288, 2018
1952018
Technological advances in maize breeding: past, present and future
C Andorf, WD Beavis, M Hufford, S Smith, WP Suza, K Wang, ...
Theoretical and applied genetics 132, 817-849, 2019
1392019
A pan-genomic approach to genome databases using maize as a model system
MR Woodhouse, EK Cannon, JL Portwood, LC Harper, JM Gardiner, ...
BMC plant biology 21, 1-10, 2021
1132021
The Locus Lookup tool at MaizeGDB: identification of genomic regions in maize by integrating sequence information with physical and genetic maps
CM Andorf, CJ Lawrence, LC Harper, ML Schaeffer, DA Campbell, ...
Bioinformatics 26 (3), 434-436, 2010
1072010
Maize GO annotation—methods, evaluation, and review (maize‐GAMER)
K Wimalanathan, I Friedberg, CM Andorf, CJ Lawrence‐Dill
Plant direct 2 (4), e00052, 2018
1062018
MaizeGDB: curation and outreach go hand-in-hand
ML Schaeffer, LC Harper, JM Gardiner, CM Andorf, DA Campbell, ...
Database 2011, bar022, 2011
942011
AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture
L Harper, J Campbell, EKS Cannon, S Jung, M Poelchau, R Walls, ...
Database 2018, bay088, 2018
752018
Crowdsourcing image analysis for plant phenomics to generate ground truth data for machine learning
N Zhou, ZD Siegel, S Zarecor, N Lee, DA Campbell, CM Andorf, ...
PLoS computational biology 14 (7), e1006337, 2018
642018
GenomeQC: a quality assessment tool for genome assemblies and gene structure annotations
N Manchanda, JL Portwood, MR Woodhouse, AS Seetharam, ...
BMC genomics 21 (1), 1-9, 2020
622020
G-quadruplex (G4) motifs in the maize (Zea mays L.) genome are enriched at specific locations in thousands of genes coupled to energy status, hypoxia, low sugar, and nutrient …
CM Andorf, M Kopylov, D Dobbs, KE Koch, ME Stroupe, CJ Lawrence, ...
Journal of Genetics and Genomics 41 (12), 627-647, 2014
602014
MaizeGDB becomes ‘sequence-centric’
TZ Sen, CM Andorf, ML Schaeffer, LC Harper, ME Sparks, J Duvick, ...
Database 2009, bap020, 2009
562009
Automated update, revision, and quality control of the maize genome annotations using MAKER-P improves the B73 RefGen_v3 gene models and identifies new genes
MY Law, KL Childs, MS Campbell, JC Stein, AJ Olson, C Holt, N Panchy, ...
Plant physiology 167 (1), 25-39, 2015
552015
Choosing a genome browser for a Model Organism Database: surveying the maize community
TZ Sen, LC Harper, ML Schaeffer, CM Andorf, TE Seigfried, DA Campbell, ...
Database 2010, baq007, 2010
512010
Exploring inconsistencies in genome-wide protein function annotations: a machine learning approach
C Andorf, D Dobbs, V Honavar
BMC bioinformatics 8, 1-12, 2007
512007
Information integration and knowledge acquisition from semantically heterogeneous biological data sources
D Caragea, J Pathak, J Bao, A Silvescu, C Andorf, D Dobbs, V Honavar
International Workshop on Data Integration in the Life Sciences, 175-190, 2005
482005
Haplotype structure in commercial maize breeding programs in relation to key founder lines
SM Coffman, MB Hufford, CM Andorf, T Lübberstedt
Theoretical and Applied Genetics 133, 547-561, 2020
352020
MaizeGDB: the maize genetics and genomics database
L Harper, J Gardiner, C Andorf, CJ Lawrence
Plant bioinformatics: Methods and protocols, 187-202, 2016
332016
Das System kann den Vorgang jetzt nicht ausführen. Versuchen Sie es später erneut.
Artikel 1–20