Carson Andorf
Carson Andorf
Computational Biologist, USDA-ARS
Bestätigte E-Mail-Adresse bei iastate.edu
Titel
Zitiert von
Zitiert von
Jahr
MaizeGDB update: new tools, data and interface for the maize model organism database
CM Andorf, EK Cannon, JL Portwood, JM Gardiner, LC Harper, ...
Nucleic acids research 44 (D1), D1195-D1201, 2016
1572016
The maize W22 genome provides a foundation for functional genomics and transposon biology
NM Springer, SN Anderson, CM Andorf, KR Ahern, F Bai, O Barad, ...
Nature genetics 50 (9), 1282-1288, 2018
942018
The Locus Lookup tool at MaizeGDB: identification of genomic regions in maize by integrating sequence information with physical and genetic maps
CM Andorf, CJ Lawrence, LC Harper, ML Schaeffer, DA Campbell, ...
Bioinformatics 26 (3), 434-436, 2010
942010
MaizeGDB 2018: the maize multi-genome genetics and genomics database
JL Portwood, MR Woodhouse, EK Cannon, JM Gardiner, LC Harper, ...
Nucleic acids research 47 (D1), D1146-D1154, 2019
912019
MaizeGDB: curation and outreach go hand-in-hand
ML Schaeffer, LC Harper, JM Gardiner, CM Andorf, DA Campbell, ...
Database 2011, 2011
842011
MaizeGDB becomes ‘sequence-centric’
TZ Sen, CM Andorf, ML Schaeffer, LC Harper, ME Sparks, J Duvick, ...
Database 2009, 2009
522009
Maize GO annotation—methods, evaluation, and review (maize‐GAMER)
K Wimalanathan, I Friedberg, CM Andorf, CJ Lawrence‐Dill
Plant Direct 2 (4), e00052, 2018
512018
Automated update, revision, and quality control of the maize genome annotations using MAKER-P improves the B73 RefGen_v3 gene models and identifies new genes
MY Law, KL Childs, MS Campbell, JC Stein, AJ Olson, C Holt, N Panchy, ...
Plant physiology 167 (1), 25-39, 2015
492015
Information integration and knowledge acquisition from semantically heterogeneous biological data sources
D Caragea, J Pathak, J Bao, A Silvescu, C Andorf, D Dobbs, V Honavar
International Workshop on Data Integration in the Life Sciences, 175-190, 2005
482005
Exploring inconsistencies in genome-wide protein function annotations: a machine learning approach
C Andorf, D Dobbs, V Honavar
BMC bioinformatics 8 (1), 1-12, 2007
462007
G-quadruplex (G4) motifs in the maize (Zea mays L.) genome are enriched at specific locations in thousands of genes coupled to energy status, hypoxia, low sugar, and nutrient …
CM Andorf, M Kopylov, D Dobbs, KE Koch, ME Stroupe, CJ Lawrence, ...
Journal of Genetics and Genomics 41 (12), 627-647, 2014
432014
Choosing a genome browser for a Model Organism Database: surveying the maize community
TZ Sen, LC Harper, ML Schaeffer, CM Andorf, TE Seigfried, DA Campbell, ...
Database 2010, 2010
432010
Ontologydriven information extraction and knowledge acquisition from heterogeneous, distributed, autonomous biological data sources
V Honavar, C Andorf, D Caragea, A Silvescu, J Reinoso-Castillo, ...
Proceedings of the IJCAI-2001 Workshop on Knowledge Discovery from …, 2001
302001
Technological advances in maize breeding: past, present and future
C Andorf, WD Beavis, M Hufford, S Smith, WP Suza, K Wang, ...
Theoretical and applied genetics 132 (3), 817-849, 2019
272019
Crowdsourcing image analysis for plant phenomics to generate ground truth data for machine learning
N Zhou, ZD Siegel, S Zarecor, N Lee, DA Campbell, CM Andorf, ...
PLoS computational biology 14 (7), e1006337, 2018
272018
Learning classifiers for assigning protein sequences to gene ontology functional families
C Andorf, A Silvescu, D Dobbs, V Honavar
Structural induction: towards automatic ontology elicitation 1001, 39, 2008
272008
AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture
L Harper, J Campbell, EKS Cannon, S Jung, M Poelchau, R Walls, ...
Database 2018, 2018
242018
POPcorn: an online resource providing access to distributed and diverse maize project data
EKS Cannon, SM Birkett, BL Braun, S Kodavali, DM Jennewein, A Yilmaz, ...
International journal of plant genomics 2011, 2011
222011
The MaizeGDB Genome Browser tutorial: one example of database outreach to biologists via video
LC Harper, ML Schaeffer, J Thistle, JM Gardiner, CM Andorf, ...
Database 2011, 2011
192011
Information integration from semantically heterogeneous biological data sources
D Caragea, J Bao, J Pathak, A Silvescu, C Andorf, D Dobbs, V Honavar
16th International Workshop on Database and Expert Systems Applications …, 2005
192005
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