| Trans Hoogsteen/sugar edge base pairing in RNA. Structures, energies, and stabilities from quantum chemical calculations A Mladek, P Sharma, A Mitra, D Bhattacharyya, J Sponer, JE Šponer The Journal of Physical Chemistry B 113 (6), 1743-1755, 2009 | 65 | 2009 |
| Quantum chemical studies of structures and binding in noncanonical RNA base pairs: the trans Watson-Crick: Watson-Crick family P Sharma, A Mitra, S Sharma, H Singh, D Bhattacharyya Journal of Biomolecular Structure and Dynamics 25 (6), 709-732, 2008 | 64 | 2008 |
| Protonation of base pairs in RNA: context analysis and quantum chemical investigations of their geometries and stabilities M Chawla, P Sharma, S Halder, D Bhattacharyya, A Mitra The Journal of Physical Chemistry B 115 (6), 1469-1484, 2011 | 58 | 2011 |
| On the role of Hoogsteen: Hoogsteen interactions in RNA: Ab initio investigations of structures and energies P Sharma, M Chawla, S Sharma, A Mitra Rna 16 (5), 942-957, 2010 | 51 | 2010 |
| On the Role of the cis Hoogsteen: Sugar-Edge Family of Base Pairs in Platforms and Triplets Quantum Chemical Insights into RNA Structural Biology P Sharma, JE Sponer, J Sponer, S Sharma, D Bhattacharyya, A Mitra The Journal of Physical Chemistry B 114 (9), 3307-3320, 2010 | 49 | 2010 |
| C8-Heteroaryl-2′-deoxyguanosine Adducts as Conformational Fluorescent Probes in the NarI Recognition Sequence KM Rankin, M Sproviero, K Rankin, P Sharma, SD Wetmore, ... The Journal of organic chemistry 77 (23), 10498-10508, 2012 | 44 | 2012 |
| Structural and biochemical impact of C8-aryl-guanine adducts within the NarI recognition DNA sequence: influence of aryl ring size on targeted and semi-targeted … M Sproviero, AMR Verwey, KM Rankin, AA Witham, DV Soldatov, ... Nucleic acids research 42 (21), 13405-13421, 2014 | 42 | 2014 |
| Electronic tuning of fluorescent 8-aryl-guanine probes for monitoring DNA duplex–quadruplex exchange M Sproviero, KL Fadock, AA Witham, RA Manderville, P Sharma, ... Chemical Science 5 (2), 788-796, 2014 | 41 | 2014 |
| Binding of gold nanoclusters with size-expanded DNA bases: a computational study of structural and electronic properties P Sharma, H Singh, S Sharma, H Singh Journal of Chemical Theory and Computation 3 (6), 2301-2311, 2007 | 40 | 2007 |
| Structural landscape of base pairs containing post-transcriptional modifications in RNA PP Seelam, P Sharma, A Mitra RNA 23 (6), 847-859, 2017 | 34 | 2017 |
| C8-linked bulky guanosine DNA adducts: experimental and computational insights into adduct conformational preferences and resulting mutagenicity AL Millen, P Sharma, SD Wetmore Future Medicinal Chemistry 4 (15), 1981-2007, 2012 | 33 | 2012 |
| Structural and energetic characterization of the major DNA adduct formed from the food mutagen ochratoxin A in the NarI hotspot sequence: influence of adduct … P Sharma, RA Manderville, SD Wetmore Nucleic acids research 42 (18), 11831-11845, 2014 | 32 | 2014 |
| Modeling the noncovalent interactions at the metabolite binding site in purine riboswitches P Sharma, S Sharma, M Chawla, A Mitra Journal of molecular modeling 15, 633-649, 2009 | 31 | 2009 |
| Base pairing in RNA structures: A computational analysis of structural aspects and interaction energies P Sharma, A Mitra, S Sharma, H Singh Journal of Chemical Sciences 119, 525-531, 2007 | 30 | 2007 |
| Modeling the conformational preference of the carbon-bonded covalent adduct formed upon exposure of 2′-deoxyguanosine to ochratoxin A P Sharma, RA Manderville, SD Wetmore Chemical Research in Toxicology 26 (5), 803-816, 2013 | 29 | 2013 |
| How do hydrophobic nucleobases differ from natural DNA nucleobases? Comparison of structural features and duplex properties from QM calculations and MD simulations I Negi, P Kathuria, P Sharma, SD Wetmore Physical Chemistry Chemical Physics 19 (25), 16365-16374, 2017 | 28 | 2017 |
| Optimization of fluorescent 8-heteroaryl-guanine probes for monitoring protein-mediated duplex→ G-quadruplex exchange KL Fadock, RA Manderville, P Sharma, SD Wetmore Organic & Biomolecular Chemistry 14 (19), 4409-4419, 2016 | 25 | 2016 |
| Photophysical properties of push–pull 8-aryl-deoxyguanosine probes within duplex and G-quadruplex structures DJM Blanchard, KL Fadock, M Sproviero, PS Deore, TZ Cservenyi, ... Journal of Materials Chemistry C 4 (14), 2915-2924, 2016 | 24 | 2016 |
| yDNA versus yyDNA pyrimidines: computational analysis of the effects of unidirectional ring expansion on the preferred sugar–base orientation, hydrogen-bonding interactions and … P Sharma, LA Lait, SD Wetmore Physical Chemistry Chemical Physics 15 (7), 2435-2448, 2013 | 24 | 2013 |
| Enhancing bulge stabilization through linear extension of C8-aryl-guanine adducts to promote polymerase blockage or strand realignment to produce a C: C mismatch M Sproviero, AMR Verwey, AA Witham, RA Manderville, P Sharma, ... Chemical Research in Toxicology 28 (8), 1647-1658, 2015 | 23 | 2015 |
Abhijit MitraProfessor (Retired) CCNSB, IIIT HyderabadBestätigte E-Mail-Adresse bei iiit.ac.in
