David Fenyo
David Fenyo
Professor, New York University
Verified email at FenyoLab.org - Homepage
Title
Cited by
Cited by
Year
Sequence and structural convergence of broad and potent HIV antibodies that mimic CD4 binding
JF Scheid, H Mouquet, B Ueberheide, R Diskin, F Klein, TYK Oliveira, ...
Science 333 (6049), 1633-1637, 2011
10382011
Proteogenomics connects somatic mutations to signalling in breast cancer
P Mertins, DR Mani, KV Ruggles, MA Gillette, KR Clauser, P Wang, ...
Nature 534 (7605), 55-62, 2016
7982016
A method for assessing the statistical significance of mass spectrometry-based protein identifications using general scoring schemes
D Fenyö, RC Beavis
Analytical chemistry 75 (4), 768-774, 2003
5282003
Classification and mutation prediction from non–small cell lung cancer histopathology images using deep learning
N Coudray, PS Ocampo, T Sakellaropoulos, N Narula, M Snuderl, ...
Nature medicine 24 (10), 1559-1567, 2018
5022018
Integrated proteogenomic characterization of human high-grade serous ovarian cancer
H Zhang, T Liu, Z Zhang, SH Payne, B Zhang, JE McDermott, JY Zhou, ...
Cell 166 (3), 755-765, 2016
4612016
An evaluation, comparison, and accurate benchmarking of several publicly available MS/MS search algorithms: sensitivity and specificity analysis
EA Kapp, F Schütz, LM Connolly, JA Chakel, JE Meza, CA Miller, D Fenyo, ...
Proteomics 5 (13), 3475-3490, 2005
4272005
Four histone variants mark the boundaries of polycistronic transcription units in Trypanosoma brucei
TN Siegel, DR Hekstra, LE Kemp, LM Figueiredo, JE Lowell, D Fenyo, ...
Genes & development 23 (9), 1063-1076, 2009
3112009
Using annotated peptide mass spectrum libraries for protein identification
R Craig, JC Cortens, D Fenyo, RC Beavis
Journal of proteome research 5 (8), 1843-1849, 2006
3112006
RADARS, a bioinformatics solution that automates proteome mass spectral analysis, optimises protein identification, and archives data in a relational database
HI Field, D Fenyö, RC Beavis
PROTEOMICS: International Edition 2 (1), 36-47, 2002
2692002
Protein indentification using mass spectrometric information
D Fenyö, J Qin, BT Chait
Electrophoresis 19 (6), 998-1005, 1998
2571998
A robust pipeline for rapid production of versatile nanobody repertoires
PC Fridy, Y Li, S Keegan, MK Thompson, I Nudelman, JF Scheid, ...
Nature methods 11 (12), 1253-1260, 2014
2282014
A modular cross-linking approach for exploring protein interactions
M Trester-Zedlitz, K Kamada, SK Burley, D Fenyö, BT Chait, TW Muir
Journal of the American Chemical Society 125 (9), 2416-2425, 2003
2262003
Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels
P Mertins, F Yang, T Liu, DR Mani, VA Petyuk, MA Gillette, KR Clauser, ...
Molecular & cellular proteomics 13 (7), 1690-1704, 2014
2222014
Identifying the proteome: software tools
D Fenyö
Current opinion in biotechnology 11 (4), 391-395, 2000
2022000
Sputtering by fast ions based on a sum of impulses
RE Johnson, BUR Sundqvist, A Hedin, D Fenyö
Physical Review B 40 (1), 49, 1989
2021989
Structural and functional properties of region II-plus of the malaria circumsporozoite protein.
P Sinnis, P Clavijo, D Fenyö, BT Chait, C Cerami, V Nussenzweig
The Journal of experimental medicine 180 (1), 297-306, 1994
1641994
A statistical basis for testing the significance of mass spectrometric protein identification results
J Eriksson, BT Chait, D Fenyö
Analytical chemistry 72 (5), 999-1005, 2000
1622000
Atypical and classical memory B cells produce Plasmodium falciparum neutralizing antibodies
MF Muellenbeck, B Ueberheide, B Amulic, A Epp, D Fenyo, CE Busse, ...
Journal of Experimental Medicine 210 (2), 389-399, 2013
1592013
Interlaboratory study characterizing a yeast performance standard for benchmarking LC-MS platform performance
AG Paulovich, D Billheimer, AJL Ham, L Vega-Montoto, PA Rudnick, ...
Molecular & Cellular Proteomics 9 (2), 242-254, 2010
1572010
Phosphotyrosine signaling networks in epidermal growth factor receptor overexpressing squamous carcinoma cells
A Thelemann, F Petti, G Griffin, K Iwata, T Hunt, T Settinari, D Fenyo, ...
Molecular & Cellular Proteomics 4 (4), 356-376, 2005
1572005
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Articles 1–20