| A genome-scale DNA repair RNAi screen identifies SPG48 as a novel gene associated with hereditary spastic paraplegia M Słabicki, M Theis, DB Krastev, S Samsonov, E Mundwiller, M Junqueira, ... PLoS biology 8 (6), e1000408, 2010 | 232 | 2010 |
| Large-scale interaction profiling of PDZ domains through proteomic peptide-phage display using human and viral phage peptidomes Y Ivarsson, R Arnold, M McLaughlin, S Nim, R Joshi, D Ray, B Liu, J Teyra, ... Proceedings of the National Academy of Sciences 111 (7), 2542-2547, 2014 | 166 | 2014 |
| A systematic approach to identify novel cancer drug targets using machine learning, inhibitor design and high-throughput screening J Jeon, S Nim, J Teyra, A Datti, JL Wrana, SS Sidhu, J Moffat, PM Kim Genome medicine 6, 1-18, 2014 | 156 | 2014 |
| Comprehensive analysis of the human SH3 domain family reveals a wide variety of non-canonical specificities J Teyra, H Huang, S Jain, X Guan, A Dong, Y Liu, W Tempel, J Min, ... Structure 25 (10), 1598-1610. e3, 2017 | 138 | 2017 |
| Lrp1 is a host entry factor for Rift Valley fever virus SS Ganaie, MM Schwarz, CM McMillen, DA Price, AX Feng, JR Albe, ... Cell 184 (20), 5163-5178. e24, 2021 | 95 | 2021 |
| Combining structural modeling with ensemble machine learning to accurately predict protein fold stability and binding affinity effects upon mutation N Berliner, J Teyra, R Colak, S Garcia Lopez, PM Kim PloS one 9 (9), e107353, 2014 | 90 | 2014 |
| Docking glycosaminoglycans to proteins: analysis of solvent inclusion SA Samsonov, J Teyra, MT Pisabarro Journal of computer-aided molecular design 25, 477-489, 2011 | 88 | 2011 |
| ELASPIC web-server: proteome-wide structure-based prediction of mutation effects on protein stability and binding affinity DK Witvliet, A Strokach, AF Giraldo-Forero, J Teyra, R Colak, PM Kim Bioinformatics 32 (10), 1589-1591, 2016 | 84 | 2016 |
| SCOWLP: a web-based database for detailed characterization and visualization of protein interfaces J Teyra, A Doms, M Schroeder, MT Pisabarro BMC bioinformatics 7, 1-7, 2006 | 77 | 2006 |
| Elucidation of the binding preferences of peptide recognition modules: SH3 and PDZ domains J Teyra, SS Sidhu, PM Kim FEBS letters 586 (17), 2631-2637, 2012 | 60 | 2012 |
| Structural and functional characterization of ubiquitin variant inhibitors of USP15 J Teyra, AU Singer, FW Schmitges, P Jaynes, SKL Lui, MJ Polyak, N Fodil, ... Structure 27 (4), 590-605. e5, 2019 | 57 | 2019 |
| A molecular dynamics approach to study the importance of solvent in protein interactions S Samsonov, J Teyra, MT Pisabarro Proteins: Structure, Function, and Bioinformatics 73 (2), 515-525, 2008 | 51 | 2008 |
| SCOWLP classification: structural comparison and analysis of protein binding regions J Teyra, M Paszkowski-Rogacz, G Anders, MT Pisabarro BMC bioinformatics 9, 1-11, 2008 | 48 | 2008 |
| Characterization of interfacial solvent in protein complexes and contribution of wet spots to the interface description J Teyra, MT Pisabarro Proteins: Structure, Function, and Bioinformatics 67 (4), 1087-1095, 2007 | 47 | 2007 |
| Protein structure from experimental evolution MA Stiffler, FJ Poelwijk, KP Brock, RR Stein, A Riesselman, J Teyra, ... Cell Systems 10 (1), 15-24. e5, 2020 | 42 | 2020 |
| Semi-supervised learning predicts approximately one third of the alternative splicing isoforms as functional proteins Y Hao, R Colak, J Teyra, C Corbi-Verge, A Ignatchenko, H Hahne, ... Cell reports 12 (2), 183-189, 2015 | 37 | 2015 |
| SCOWLP update: 3D classification of protein-protein,-peptide,-saccharide and-nucleic acid interactions, and structure-based binding inferences across folds J Teyra, SA Samsonov, S Schreiber, MT Pisabarro BMC bioinformatics 12, 1-6, 2011 | 36 | 2011 |
| Magnetite biomineralization in Magnetospirillum magneticum is regulated by a switch-like behavior in the HtrA protease MamE DM Hershey, PJ Browne, AT Iavarone, J Teyra, EH Lee, SS Sidhu, ... Journal of Biological Chemistry 291 (34), 17941-17952, 2016 | 31 | 2016 |
| Multifaceted N-degron recognition and ubiquitylation by GID/CTLH E3 ligases J Chrustowicz, D Sherpa, J Teyra, MS Loke, GM Popowicz, J Basquin, ... Journal of Molecular Biology 434 (2), 167347, 2022 | 28 | 2022 |
| Predicting the effect of mutations on protein folding and protein-protein interactions A Strokach, C Corbi-Verge, J Teyra, PM Kim Computational methods in protein evolution, 1-17, 2019 | 24 | 2019 |
