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Tobias Müller
Tobias Müller
Bioinformatics Department, University of Würzburg
Bestätigte E-Mail-Adresse bei biozentrum.uni-wuerzburg.de
Titel
Zitiert von
Zitiert von
Jahr
Identifying functional modules in protein–protein interaction networks: an integrated exact approach
MT Dittrich, GW Klau, A Rosenwald, T Dandekar, T Müller
Bioinformatics 24 (13), i223-i231, 2008
5632008
5.8 S-28S rRNA interaction and HMM-based ITS2 annotation
A Keller, T Schleicher, J Schultz, T Müller, T Dandekar, M Wolf
Gene 430 (1-2), 50-57, 2009
5282009
A common core of secondary structure of the internal transcribed spacer 2 (ITS2) throughout the Eukaryota
J SCHULTZ, S MAISEL, D GERLACH, T MÜLLER, M WOLF
RNA 11 (4), 361-364, 2005
4122005
4SALE–a tool for synchronous RNA sequence and secondary structure alignment and editing
PN Seibel, T Müller, T Dandekar, J Schultz, M Wolf
BMC bioinformatics 7 (1), 1-7, 2006
4022006
Distinguishing species
T Müller, N Philippi, T Dandekar, J Schultz, M Wolf
RNA 13 (9), 1469-1472, 2007
3672007
Modeling amino acid replacement
T Müller, M Vingron
Journal of Computational Biology 7, 761-776, 2000
3502000
The ITS2 Database III—sequences and structures for phylogeny
C Koetschan, F Förster, A Keller, T Schleicher, B Ruderisch, R Schwarz, ...
Nucleic acids research 38 (suppl_1), D275-D279, 2010
3022010
Synchronous visual analysis and editing of RNA sequence and secondary structure alignments using 4SALE
PN Seibel, T Müller, T Dandekar, M Wolf
BMC research notes 1, 1-7, 2008
2922008
Metabolic Programming of MEST DNA Methylation by Intrauterine Exposure to Gestational Diabetes Mellitus
N El Hajj, G Pliushch, E Schneider, M Dittrich, T Müller, M Korenkov, ...
Diabetes 62, 1320-1328, 2013
2792013
BioNet: an R-Package for the functional analysis of biological networks
D Beisser, GW Klau, T Dandekar, T Müller, MT Dittrich
Bioinformatics 26 (8), 1129-1130, 2010
2632010
The internal transcribed spacer 2 database—a web server for (not only) low level phylogenetic analyses
J Schultz, T Müller, M Achtziger, PN Seibel, T Dandekar, M Wolf
Nucleic acids research 34 (suppl_2), W704-W707, 2006
2252006
Whole-genome comparison of disease and carriage strains provides insights into virulence evolution in Neisseria meningitidis
C Schoen, J Blom, H Claus, A Schramm-Glück, P Brandt, T Müller, ...
Proceedings of the national academy of sciences 105 (9), 3473-3478, 2008
2232008
Homology modeling revealed more than 20,000 rRNA internal transcribed spacer 2 (ITS2) secondary structures
M Wolf, M Achtziger, J Schultz, T Dandekar, T Müller
RNA 11 (11), 1616-1623, 2005
2122005
The ITS2 Database II: homology modelling RNA structure for molecular systematics
C Selig, M Wolf, T Müller, T Dandekar, J Schultz
Nucleic acids research 36 (suppl_1), D377-D380, 2007
1822007
Including RNA secondary structures improves accuracy and robustness in reconstruction of phylogenetic trees
A Keller, F Förster, T Müller, T Dandekar, J Schultz, M Wolf
Biology Direct 5, 1-12, 2010
1762010
Frequency of regulatory T cells determines the outcome of the T-cell-engaging antibody blinatumomab in patients with B-precursor ALL
J Duell, M Dittrich, T Bedke, T Mueller, F Eisele, A Rosenwald, L Rasche, ...
Leukemia 31 (10), 2181-2190, 2017
1752017
Estimating amino acid substitution models: a comparison of Dayhoff's estimator, the resolvent approach and a maximum likelihood method
T Müller, R Spang, M Vingron
Molecular biology and evolution 19 (1), 8-13, 2002
1692002
ITS2 database IV: interactive taxon sampling for internal transcribed spacer 2 based phylogenies
C Koetschan, T Hackl, T Müller, M Wolf, F Förster, J Schultz
Molecular Phylogenetics and Evolution 63 (3), 585-588, 2012
1512012
ProfDistS:(profile-) distance based phylogeny on sequence—structure alignments
M Wolf, B Ruderisch, T Dandekar, J Schultz, T Müller
Bioinformatics 24 (20), 2401-2402, 2008
1462008
Phylogeny of Firmicutes with special reference to Mycoplasma (Mollicutes) as inferred from phosphoglycerate kinase amino acid sequence data
M Wolf, T Müller, T Dandekar, JD Pollack
International journal of systematic and evolutionary microbiology 54 (3 …, 2004
1392004
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