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Atsushi Yamagata
Atsushi Yamagata
Bestätigte E-Mail-Adresse bei iam.u-tokyo.ac.jp
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Zitiert von
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Structural basis for specific cleavage of Lys 63-linked polyubiquitin chains
Y Sato, A Yoshikawa, A Yamagata, H Mimura, M Yamashita, K Ookata, ...
Nature 455 (7211), 358-362, 2008
3852008
Structural basis for specific recognition of Lys 63‐linked polyubiquitin chains by tandem UIMs of RAP80
Y Sato, A Yoshikawa, H Mimura, M Yamashita, A Yamagata, S Fukai
The EMBO journal 28 (16), 2461-2468, 2009
2212009
Structural basis for specific recognition of Lys 63‐linked polyubiquitin chains by NZF domains of TAB2 and TAB3
Y Sato, A Yoshikawa, M Yamashita, A Yamagata, S Fukai
The EMBO journal 28 (24), 3903-3909, 2009
1452009
Structures of CYLD USP with Met1-or Lys63-linked diubiquitin reveal mechanisms for dual specificity
Y Sato, E Goto, Y Shibata, Y Kubota, A Yamagata, S Goto-Ito, K Kubota, ...
Nature structural & molecular biology 22 (3), 222-229, 2015
1372015
Specific recognition of linear ubiquitin chains by the Npl4 zinc finger (NZF) domain of the HOIL-1L subunit of the linear ubiquitin chain assembly complex
Y Sato, H Fujita, A Yoshikawa, M Yamashita, A Yamagata, SE Kaiser, ...
Proceedings of the National Academy of Sciences 108 (51), 20520-20525, 2011
1182011
Structural basis for the Rho-and phosphoinositide-dependent localization of the exocyst subunit Sec3
M Yamashita, K Kurokawa, Y Sato, A Yamagata, H Mimura, A Yoshikawa, ...
Nature structural & molecular biology 17 (2), 180-186, 2010
1102010
Hexameric structures of the archaeal secretion ATPase GspE and implications for a universal secretion mechanism
A Yamagata, JA Tainer
The EMBO journal 26 (3), 878-890, 2007
1092007
The crystal structure of exonuclease RecJ bound to Mn2+ ion suggests how its characteristic motifs are involved in exonuclease activity
A Yamagata, Y Kakuta, R Masui, K Fukuyama
Proceedings of the National Academy of Sciences 99 (9), 5908-5912, 2002
1022002
Crystal structure of the NEMO ubiquitin-binding domain in complex with Lys 63-linked di-ubiquitin
A Yoshikawa, Y Sato, M Yamashita, H Mimura, A Yamagata, S Fukai
FEBS letters 583 (20), 3317-3322, 2009
852009
Molecular basis of Lys-63-linked polyubiquitination inhibition by the interaction between human deubiquitinating enzyme OTUB1 and ubiquitin-conjugating enzyme UBC13
Y Sato, A Yamagata, S Goto-Ito, K Kubota, R Miyamoto, S Nakada, ...
Journal of Biological Chemistry 287 (31), 25860-25868, 2012
802012
Structural basis of epilepsy-related ligand–receptor complex LGI1–ADAM22
A Yamagata, Y Miyazaki, N Yokoi, H Shigematsu, Y Sato, S Goto-Ito, ...
Nature communications 9 (1), 1546, 2018
722018
Structural basis for specific cleavage of Lys6-linked polyubiquitin chains by USP30
Y Sato, K Okatsu, Y Saeki, K Yamano, N Matsuda, A Kaiho, A Yamagata, ...
Nature structural & molecular biology 24 (11), 911-919, 2017
672017
Structural insight into the membrane insertion of tail‐anchored proteins by Get3
A Yamagata, H Mimura, Y Sato, M Yamashita, A Yoshikawa, S Fukai
Genes to Cells 15 (1), 29-41, 2010
642010
Overexpression, purification and characterization of RecJ protein from Thermus thermophilus HB8 and its core domain
A Yamagata, R Masui, Y Kakuta, S Kuramitsu, K Fukuyama
Nucleic Acids Research 29 (22), 4617-4624, 2001
632001
Mechanisms of splicing-dependent trans-synaptic adhesion by PTPδ–IL1RAPL1/IL-1RAcP for synaptic differentiation
A Yamagata, T Yoshida, Y Sato, S Goto-Ito, T Uemura, A Maeda, ...
Nature communications 6 (1), 6926, 2015
612015
Structure of Slitrk2–PTPδ complex reveals mechanisms for splicing-dependent trans-synaptic adhesion
A Yamagata, Y Sato, S Goto-Ito, T Uemura, A Maeda, T Shiroshima, ...
Scientific Reports 5 (1), 9686, 2015
552015
A SNARE geranylgeranyltransferase essential for the organization of the Golgi apparatus
R Shirakawa, S Goto‐Ito, K Goto, S Wakayama, H Kubo, N Sakata, ...
The EMBO journal 39 (8), e104120, 2020
542020
LGI1–ADAM22–MAGUK configures transsynaptic nanoalignment for synaptic transmission and epilepsy prevention
Y Fukata, X Chen, S Chiken, Y Hirano, A Yamagata, H Inahashi, M Sanbo, ...
Proceedings of the National Academy of Sciences 118 (3), e2022580118, 2021
532021
Structural basis for CRMP2-induced axonal microtubule formation
S Niwa, F Nakamura, Y Tomabechi, M Aoki, H Shigematsu, T Matsumoto, ...
Scientific reports 7 (1), 10681, 2017
522017
Structural insights into modulation and selectivity of transsynaptic neurexin–LRRTM interaction
A Yamagata, S Goto-Ito, Y Sato, T Shiroshima, A Maeda, M Watanabe, ...
Nature communications 9 (1), 3964, 2018
462018
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