Michael R. Crusoe
Michael R. Crusoe
Common Workflow Language project
Bestätigte E-Mail-Adresse bei commonwl.org - Startseite
Titel
Zitiert von
Zitiert von
Jahr
The khmer software package: enabling efficient nucleotide sequence analysis
MR Crusoe, HF Alameldin, S Awad, E Boucher, A Caldwell, R Cartwright, ...
F1000Research 4, 2015
268*2015
Common Workflow Language v1.0
P Amstutz, MR Crusoe, N Tijanić, B Chapman, J Chilton, M Heuer, ...
FigShare, 2016
153*2016
MGnify: the microbiome analysis resource in 2020
AL Mitchell, A Almeida, M Beracochea, M Boland, J Burgin, G Cochrane, ...
Nucleic acids research 48 (D1), D570-D578, 2020
432020
Sharing interoperable workflow provenance: A review of best practices and their practical application in CWLProv
FZ Khan, S Soiland-Reyes, RO Sinnott, A Lonie, C Goble, MR Crusoe
GigaScience 8 (11), giz095, 2019
23*2019
Comparative genomics reveals accelerated evolution in conserved pathways during the diversification of anole lizards
M Tollis, ED Hutchins, J Stapley, SM Rupp, WL Eckalbar, I Maayan, ...
Genome biology and evolution 10 (2), 489-506, 2018
222018
FAIR computational workflows
C Goble, S Cohen-Boulakia, S Soiland-Reyes, D Garijo, Y Gil, MR Crusoe, ...
Data Intelligence 2 (1-2), 108-121, 2020
192020
Enabling precision medicine via standard communication of HTS provenance, analysis, and results
G Alterovitz, D Dean, C Goble, MR Crusoe, S Soiland-Reyes, A Bell, ...
PLoS biology 16 (12), e3000099, 2018
172018
Developing reproducible bioinformatics analysis workflows for heterogeneous computing environments to support African genomics
S Baichoo, Y Souilmi, S Panji, G Botha, A Meintjes, S Hazelhurst, ...
BMC bioinformatics 19 (1), 1-13, 2018
152018
Recommendations for the packaging and containerizing of bioinformatics software
B Gruening, O Sallou, P Moreno, F da Veiga Leprevost, H Ménager, ...
F1000Research 7, 2018
132018
Robust Cross-Platform Workflows: How Technical and Scientific Communities Collaborate to Develop, Test and Share Best Practices for Data Analysis
S Möller, SW Prescott, L Wirzenius, P Reinholdtsen, B Chapman, P Prins, ...
Data Science and Engineering, 1-13, 2017
112017
Walking the talk: adopting and adapting sustainable scientific software development processes in a small biology lab
MR Crusoe, CT Brown
Journal of open research software 4 (1), 2016
9*2016
SID-0002 Finger minutiae-based biometric profile for seafarers' identity documents: The standard for the biometric template required by the Convention No. 185
CL Musselman, VS Valencia, MR Crusoe
International Labour Organization, 2006
9*2006
Channeling Community Contributions to Scientific Software: A Sprint Experience
CTB Michael R. Crusoe
Journal of Open Research Software 4, 2016
7*2016
Brad Chapman, John Chilton, Michael Heuer, Andrey Kartashov, Dan Leehr, Hervé Ménager, Maya Nedeljkovich, Matt Scales, Stian Soiland-Reyes, Luka Stojanovic
P Amstutz, MR Crusoe, N Tijanić
Common workflow language, v1. 0, 2016
72016
Using bio. tools to generate and annotate workbench tool descriptions
KH Hillion, I Kuzmin, A Khodak, E Rasche, M Crusoe, H Peterson, J Ison, ...
F1000Research 6, 2017
62017
Scalable workflows and reproducible data analysis for genomics
F Strozzi, R Janssen, R Wurmus, MR Crusoe, G Githinji, P Di Tommaso, ...
Evolutionary Genomics, 723-745, 2019
42019
Organizing and running bioinformatics hackathons within Africa: The H3ABioNet cloud computing experience
AE Ahmed, PT Mpangase, S Panji, S Baichoo, Y Souilmi, FM Fadlelmola, ...
AAS open research 1, 2018
42018
Search for computational workflow synergies in reproducible research data analyses in particle physics and life sciences
T Šimko, K Cranmer, MR Crusoe, L Heinrich, A Khodak, D Kousidis, ...
2018 IEEE 14th International Conference on e-Science (e-Science), 403-404, 2018
22018
CWL Viewer: The Common Workflow Language Viewer
M Robinson, S Soiland-Reyes, MR Crusoe, C Goble
Bioinformatics Open Source Conference (BOSC) 2017, 2017
22017
Capturing interoperable reproducible workflows
S Soiland-Reyes, FZ Khan, R Sinnott, A Lonie, MR Crusoe, C Goble
Workshop on research objects: workshop at IEEE eScience 2018, 2018
12018
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