Michael R. Crusoe
Michael R. Crusoe
Common Workflow Language project
Bestätigte E-Mail-Adresse bei commonwl.org - Startseite
Zitiert von
Zitiert von
The khmer software package: enabling efficient nucleotide sequence analysis
MR Crusoe, HF Alameldin, S Awad, E Boucher, A Caldwell, R Cartwright, ...
F1000Research 4, 2015
Common Workflow Language v1.0
P Amstutz, MR Crusoe, N Tijanić, B Chapman, J Chilton, M Heuer, ...
FigShare, 2016
MGnify: the microbiome analysis resource in 2020
AL Mitchell, A Almeida, M Beracochea, M Boland, J Burgin, G Cochrane, ...
Nucleic acids research 48 (D1), D570-D578, 2020
Sharing interoperable workflow provenance: A review of best practices and their practical application in CWLProv
FZ Khan, S Soiland-Reyes, RO Sinnott, A Lonie, C Goble, MR Crusoe
GigaScience 8 (11), giz095, 2019
Comparative genomics reveals accelerated evolution in conserved pathways during the diversification of anole lizards
M Tollis, ED Hutchins, J Stapley, SM Rupp, WL Eckalbar, I Maayan, ...
Genome biology and evolution 10 (2), 489-506, 2018
FAIR computational workflows
C Goble, S Cohen-Boulakia, S Soiland-Reyes, D Garijo, Y Gil, MR Crusoe, ...
Data Intelligence 2 (1-2), 108-121, 2020
Enabling precision medicine via standard communication of HTS provenance, analysis, and results
G Alterovitz, D Dean, C Goble, MR Crusoe, S Soiland-Reyes, A Bell, ...
PLoS biology 16 (12), e3000099, 2018
Developing reproducible bioinformatics analysis workflows for heterogeneous computing environments to support African genomics
S Baichoo, Y Souilmi, S Panji, G Botha, A Meintjes, S Hazelhurst, ...
BMC bioinformatics 19 (1), 1-13, 2018
Recommendations for the packaging and containerizing of bioinformatics software
B Gruening, O Sallou, P Moreno, F da Veiga Leprevost, H Ménager, ...
F1000Research 7, 2018
Robust Cross-Platform Workflows: How Technical and Scientific Communities Collaborate to Develop, Test and Share Best Practices for Data Analysis
S Möller, SW Prescott, L Wirzenius, P Reinholdtsen, B Chapman, P Prins, ...
Data Science and Engineering, 1-13, 2017
Walking the talk: adopting and adapting sustainable scientific software development processes in a small biology lab
MR Crusoe, CT Brown
Journal of open research software 4 (1), 2016
SID-0002 Finger minutiae-based biometric profile for seafarers' identity documents: The standard for the biometric template required by the Convention No. 185
CL Musselman, VS Valencia, MR Crusoe
International Labour Organization, 2006
Channeling Community Contributions to Scientific Software: A Sprint Experience
CTB Michael R. Crusoe
Journal of Open Research Software 4, 2016
Brad Chapman, John Chilton, Michael Heuer, Andrey Kartashov, Dan Leehr, Hervé Ménager, Maya Nedeljkovich, Matt Scales, Stian Soiland-Reyes, Luka Stojanovic
P Amstutz, MR Crusoe, N Tijanić
Common workflow language, v1. 0, 2016
Using bio. tools to generate and annotate workbench tool descriptions
KH Hillion, I Kuzmin, A Khodak, E Rasche, M Crusoe, H Peterson, J Ison, ...
F1000Research 6, 2017
Scalable workflows and reproducible data analysis for genomics
F Strozzi, R Janssen, R Wurmus, MR Crusoe, G Githinji, P Di Tommaso, ...
Evolutionary Genomics, 723-745, 2019
Organizing and running bioinformatics hackathons within Africa: The H3ABioNet cloud computing experience
AE Ahmed, PT Mpangase, S Panji, S Baichoo, Y Souilmi, FM Fadlelmola, ...
AAS open research 1, 2018
Search for computational workflow synergies in reproducible research data analyses in particle physics and life sciences
T Šimko, K Cranmer, MR Crusoe, L Heinrich, A Khodak, D Kousidis, ...
2018 IEEE 14th International Conference on e-Science (e-Science), 403-404, 2018
CWL Viewer: The Common Workflow Language Viewer
M Robinson, S Soiland-Reyes, MR Crusoe, C Goble
Bioinformatics Open Source Conference (BOSC) 2017, 2017
Capturing interoperable reproducible workflows
S Soiland-Reyes, FZ Khan, R Sinnott, A Lonie, MR Crusoe, C Goble
Workshop on research objects: workshop at IEEE eScience 2018, 2018
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