| Navigating the tip of the genomic iceberg: Next‐generation sequencing for plant systematics SCK Straub, M Parks, K Weitemier, M Fishbein, RC Cronn, A Liston American journal of botany 99 (2), 349-364, 2012 | 581 | 2012 |
| Increasing phylogenetic resolution at low taxonomic levels using massively parallel sequencing of chloroplast genomes M Parks, R Cronn, A Liston BMC biology 7 (1), 1-17, 2009 | 527 | 2009 |
| Multiplex sequencing of plant chloroplast genomes using Solexa sequencing-by-synthesis technology R Cronn, A Liston, M Parks, DS Gernandt, R Shen, T Mockler Nucleic acids research 36 (19), e122-e122, 2008 | 493 | 2008 |
| Targeted enrichment strategies for next‐generation plant biology R Cronn, BJ Knaus, A Liston, PJ Maughan, M Parks, JV Syring, J Udall American journal of botany 99 (2), 291-311, 2012 | 226 | 2012 |
| Building a model: developing genomic resources for common milkweed (Asclepias syriaca) with low coverage genome sequencing SCK Straub, M Fishbein, T Livshultz, Z Foster, M Parks, K Weitemier, ... BMC genomics 12 (1), 1-22, 2011 | 149 | 2011 |
| Separating the wheat from the chaff: mitigating the effects of noise in a plastome phylogenomic data set from Pinus L. (Pinaceae) M Parks, R Cronn, A Liston BMC Evolutionary Biology 12, 1-17, 2012 | 114 | 2012 |
| Finding a (pine) needle in a haystack: chloroplast genome sequence divergence in rare and widespread pines JB Whittall, J Syring, M Parks, J Buenrostro, C Dick, A Liston, R Cronn Molecular Ecology 19, 100-114, 2010 | 109 | 2010 |
| Low diversity in the mitogenome of sperm whales revealed by next-generation sequencing A Alexander, D Steel, B Slikas, K Hoekzema, C Carraher, M Parks, ... Genome biology and evolution 5 (1), 113-129, 2013 | 55 | 2013 |
| Comparison of nuclear, plastid, and mitochondrial phylogenies and the origin of wild octoploid strawberry species R Govindarajulu, M Parks, JA Tennessen, A Liston, TL Ashman American Journal of Botany 102 (4), 544-554, 2015 | 50 | 2015 |
| Phylogenomics reveals an extensive history of genome duplication in diatoms (Bacillariophyta) MB Parks, T Nakov, EC Ruck, NJ Wickett, AJ Alverson American journal of botany 105 (3), 330-347, 2018 | 46 | 2018 |
| Signal, uncertainty, and conflict in phylogenomic data for a diverse lineage of microbial eukaryotes (Diatoms, Bacillariophyta) MB Parks, NJ Wickett, AJ Alverson Molecular Biology and Evolution 35 (1), 80-93, 2018 | 41 | 2018 |
| Bioclimatic, ecological, and phenotypic intermediacy and high genetic admixture in a natural hybrid of octoploid strawberries I Salamone, R Govindarajulu, S Falk, M Parks, A Liston, TL Ashman American Journal of Botany 100 (5), 939-950, 2013 | 34 | 2013 |
| Ancient population genomics and the study of evolution M Parks, S Subramanian, C Baroni, MC Salvatore, G Zhang, CD Millar, ... Philosophical Transactions of the Royal Society B: Biological Sciences 370 …, 2015 | 29 | 2015 |
| Impacts of low coverage depths and post-mortem DNA damage on variant calling: a simulation study M Parks, D Lambert BMC genomics 16 (1), 1-12, 2015 | 28 | 2015 |
| Use of the chloroplast gene ycf1 for the genetic differentiation of pine nuts obtained from consumers experiencing dysgeusia SM Handy, MB Parks, JR Deeds, A Liston, LS De Jager, S Luccioli, ... Journal of agricultural and food chemistry 59 (20), 10995-11002, 2011 | 25 | 2011 |
| Phylogenetics of extant and fossil Pinaceae: methods for increasing topological stability DS Gernandt, G Holman, C Campbell, M Parks, S Mathews, LA Raubeson, ... Botany 94 (9), 863-884, 2016 | 24 | 2016 |
| Recurrent loss, horizontal transfer, and the obscure origins of mitochondrial introns in diatoms (Bacillariophyta) WX Guillory, A Onyshchenko, EC Ruck, M Parks, T Nakov, NJ Wickett, ... Genome biology and evolution 10 (6), 1504-1515, 2018 | 23 | 2018 |
| The salivary metatranscriptome as an accurate diagnostic indicator of oral cancer G Banavar, O Ogundijo, R Toma, S Rajagopal, YK Lim, K Tang, ... NPJ Genomic Medicine 6 (1), 105, 2021 | 19 | 2021 |
| Newly developed primers for complete ycf1 amplification in Pinus (Pinaceae) chloroplasts with possible family‐wide utility M Parks, A Liston, R Cronn American Journal of Botany 98 (7), e185-e188, 2011 | 12 | 2011 |
| The study of stream litter accumulation as a model for cross-disciplinary, transformative, affordable, and scalable undergraduate research experiences in STEM MB Parks, EP Hendryx, AT Taylor Interdisciplinary Journal of Environmental and Science Education 17 (3), e2245, 2021 | 6 | 2021 |
