Giovanni Bussi - Google Scholar Citations

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	All	Since 2015
Citations	14221	10276
h-index	35	30
i10-index	66	58

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Co-authors

michele parrinelloDepartment of ChemistryVerified email at phys.chem.ethz.ch
Elisa MOLINARIUniversity of Modena and Reggio Emilia & CNR-Nano, Modena, ItalyVerified email at unimore.it
Sandro BottaroItalian Institute of TechnologyVerified email at iit.it
Davide BranduardiApplications Scientist, Schrödinger IncVerified email at schrodinger.com
Davide DonadioUniversity of California DavisVerified email at ucdavis.edu
Marilia Junqueira CaldasUniversity of São PauloVerified email at usp.br
Massimiliano BonomiInstitut Pasteur - CNRSVerified email at pasteur.fr
Alessandro LaioSISSAVerified email at sissa.it
Alejandro Gil-LeyNIHVerified email at nih.gov
Associate Professor Paolo Raiteri, PhDCurtin UniversityVerified email at curtin.edu.au
Carlo CamilloniUniversity of MilanoVerified email at unimi.it
Michele CeriottiAssistant Professor at EPFL, Institute of MaterialsVerified email at epfl.ch
Michal OtyepkaDepartment of Physical Chemistry, Palacký UniversityVerified email at upol.cz
Giovanni PinamontiFreie Universität, BerlinVerified email at fu-berlin.de
Francesco Luigi GervasioProfessor of Chemistry, Professor of Structural and Molecular Biology and Chair of Bio-molecularVerified email at ucl.ac.uk
Gareth TribelloSchool of Maths and Physics, Queen's University BelfastVerified email at qub.ac.uk
Francesco Di PalmaIstituto Italiano di TecnologiaVerified email at iit.it
Alessandro BarducciCentre de Biochimie Structurale, Montpellier, FranceVerified email at cbs.cnrs.fr
Andrea FerrettiResearcher at CNR, Istituto NanoscienzeVerified email at unimore.it
Andrea CesariPhD, SISSAVerified email at sissa.it

Giovanni Bussi

Scuola Internazionale Superiore di Studi Avanzati, Trieste, Italy

Verified email at sissa.it - Homepage

Biophysics RNA computational physics free-energy calculations molecular dynamics


Title	Cited by	Year
Canonical sampling through velocity rescaling G Bussi, D Donadio, M Parrinello Journal of Chemical Physics 126, 014101, 2007	6402	2007
Well-tempered metadynamics: a smoothly converging and tunable free-energy method A Barducci, G Bussi, M Parrinello Physical review letters 100 (2), 020603, 2008	1354	2008
PLUMED: A portable plugin for free-energy calculations with molecular dynamics M Bonomi, D Branduardi, G Bussi, C Camilloni, D Provasi, P Raiteri, ... Computer Physics Communications 180 (10), 1961-1972, 2009	1046	2009
PLUMED 2: New feathers for an old bird GA Tribello, M Bonomi, D Branduardi, C Camilloni, G Bussi Computer Physics Communications 185 (2), 604-613, 2014	962	2014
Free-energy landscape for β hairpin folding from combined parallel tempering and metadynamics G Bussi, FL Gervasio, A Laio, M Parrinello Journal of the American Chemical Society 128 (41), 13435-13441, 2006	415	2006
Equilibrium free energies from nonequilibrium metadynamics G Bussi, A Laio, M Parrinello Physical review letters 96 (9), 090601, 2006	404	2006
Excitons in carbon nanotubes: An ab initio symmetry-based approach E Chang, G Bussi, A Ruini, E Molinari Physical review letters 92 (19), 196401, 2004	336	2004
Enhanced sampling in molecular dynamics using metadynamics, replica-exchange, and temperature-acceleration C Abrams, G Bussi Entropy 16 (1), 163-199, 2014	250	2014
Accurate sampling using Langevin dynamics G Bussi, M Parrinello Physical Review E 75 (5), 056707, 2007	214	2007
Solid state effects on exciton states and optical properties of PPV A Ruini, MJ Caldas, G Bussi, E Molinari Physical review letters 88 (20), 206403, 2002	193	2002
Isothermal-isobaric molecular dynamics using stochastic velocity rescaling G Bussi, T Zykova-Timan, M Parrinello The Journal of chemical physics 130 (7), 074101, 2009	183	2009
Nuclear quantum effects in solids using a colored-noise thermostat M Ceriotti, G Bussi, M Parrinello Physical review letters 103 (3), 030603, 2009	167	2009
Colored-noise thermostats à la carte M Ceriotti, G Bussi, M Parrinello Journal of Chemical Theory and Computation 6 (4), 1170-1180, 2010	166	2010
Langevin equation with colored noise for constant-temperature molecular dynamics simulations M Ceriotti, G Bussi, M Parrinello Physical review letters 102 (2), 20601, 2009	145	2009
Metadynamics with adaptive Gaussians D Branduardi, G Bussi, M Parrinello Journal of chemical theory and computation 8 (7), 2247-2254, 2012	131	2012
RNA structural dynamics as captured by molecular simulations: a comprehensive overview J Šponer, G Bussi, M Krepl, P Banáš, S Bottaro, RA Cunha, A Gil-Ley, ... Chemical reviews 118 (8), 4177-4338, 2018	110	2018
Hamiltonian replica exchange in GROMACS: a flexible implementation G Bussi Molecular Physics 112 (3-4), 379-384, 2014	110	2014
Stochastic thermostats: comparison of local and global schemes G Bussi, M Parrinello Computer Physics Communications 179 (1-3), 26-29, 2008	99	2008
The role of nucleobase interactions in RNA structure and dynamics S Bottaro, F Di Palma, G Bussi Nucleic acids research 42 (21), 13306-13314, 2014	68	2014
Enhanced conformational sampling using replica exchange with collective-variable tempering A Gil-Ley, G Bussi Journal of chemical theory and computation 11 (3), 1077-1085, 2015	61	2015

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