| Passive and active DNA methylation and the interplay with genetic variation in gene regulation M Gutierrez-Arcelus, T Lappalainen, SB Montgomery, A Buil, H Ongen, ... elife 2, e00523, 2013 | 492 | 2013 |
| Oriented collagen fibers direct tumor cell intravasation W Han, S Chen, W Yuan, Q Fan, J Tian, X Wang, L Chen, X Zhang, W Wei, ... Proceedings of the National Academy of Sciences 113 (40), 11208-11213, 2016 | 439* | 2016 |
| Coordinated effects of sequence variation on DNA binding, chromatin structure, and transcription H Kilpinen, SM Waszak, AR Gschwind, SK Raghav, RM Witwicki, A Orioli, ... Science 342 (6159), 744-747, 2013 | 398 | 2013 |
| Measurement of average decoding rates of the 61 sense codons in vivo J Gardin, R Yeasmin, A Yurovsky, Y Cai, S Skiena, B Futcher Elife 3, e03735, 2014 | 240 | 2014 |
| Population variation and genetic control of modular chromatin architecture in humans SM Waszak, O Delaneau, AR Gschwind, H Kilpinen, SK Raghav, ... Cell 162 (5), 1039-1050, 2015 | 238 | 2015 |
| Tissue-specific effects of genetic and epigenetic variation on gene regulation and splicing M Gutierrez-Arcelus, H Ongen, T Lappalainen, SB Montgomery, A Buil, ... PLoS genetics 11 (1), e1004958, 2015 | 231 | 2015 |
| Re-annotation of 12,495 prokaryotic 16S rRNA 3’ends and analysis of Shine-Dalgarno and anti-Shine-Dalgarno sequences MR Amin, A Yurovsky, Y Chen, S Skiena, B Futcher PloS one 13 (8), e0202767, 2018 | 30 | 2018 |
| Reply to Simmonds et al.: Codon pair and dinucleotide bias have not been functionally distinguished B Futcher, O Gorbatsevych, SH Shen, CB Stauft, Y Song, B Wang, ... Proceedings of the National Academy of Sciences 112 (28), E3635-E3636, 2015 | 26 | 2015 |
| Flurf, an automated flu virus reassortment finder based on phylogenetic trees A Yurovsky, BME Moret 2010 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2010 | 23 | 2010 |
| FluRF, an automated flu virus reassortment finder based on phylogenetic trees A Yurovsky, BME Moret Bioinformatics and Biomedicine (BIBM), 2010 IEEE International Conference, 2010 | 23 | 2010 |
| Optimizing circuit layouts by configuring rooms for placing devices P Gopalakrishnan, A Yurovsky US Patent 7,665,054, 2010 | 20 | 2010 |
| Deepannotator: genome annotation with deep learning MR Amin, A Yurovsky, Y Tian, S Skiena Proceedings of the 2018 ACM international conference on bioinformatics …, 2018 | 16 | 2018 |
| Identification and removal of low-complexity sites in allele-specific analysis of ChIP-seq data SM Waszak, H Kilpinen, AR Gschwind, A Orioli, SK Raghav, RM Witwicki, ... Bioinformatics 30 (2), 165-171, 2014 | 14 | 2014 |
| Prokaryotic coding regions have little if any specific depletion of Shine-Dalgarno motifs A Yurovsky, MR Amin, J Gardin, Y Chen, S Skiena, B Futcher PloS one 13 (8), e0202768, 2018 | 13 | 2018 |
| Registry for electronic design automation of integrated circuits R Colwell, GSC Lamant, A Yurovsky, T Rosek US Patent 7,945,890, 2011 | 8 | 2011 |
| Pre-Phaser: precise cell-cycle phase detector for scRNA-seq A Yurovsky, B Futcher, S Skiena Proceedings of the 10th ACM International Conference on Bioinformatics …, 2019 | 2 | 2019 |
| Gene recoding by synonymous mutations creates promiscuous intragenic transcription initiation in mycobacteria NK Hegelmeyer, LA Parkin, ML Previti, J Andrade, R Utama, RJ Sejour, ... Mbio 14 (5), e00841-23, 2023 | 1 | 2023 |
| No ramp needed: spandrels, statistics, and a slippery slope R Sejour, J Leatherwood, A Yurovsky, B Futcher bioRxiv, 2022.06. 27.497802, 2022 | 1 | 2022 |
| A Statistical Detector for Ribosomal Frameshifts and Dual Encodings based on Ribosome Profiling A Yurovsky, J Gardin, B Futcher, S Skiena bioRxiv, 2022.06. 06.495024, 2022 | 1 | 2022 |
| Modified protein encoding sequences having increased rare hexamer content B Futcher, J Gardin, S Skiena, A Yurovsky, E Wimmer, S Mueller US Patent App. 15/773,685, 2019 | 1 | 2019 |
Bruce FutcherProfessor of Molecular Genetics and Microbiology, Stony Brook UniversityBestätigte E-Mail-Adresse bei stonybrook.edu
