Leo van Iersel

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Steven KelkAssociate professor, Department of Advanced Computing Sciences, Maastricht UniversityVerified email at maastrichtuniversity.nl
Leen StougieSenior Researcher CWI, Prof. of Operations Research Vrije Universiteit, AmsterdamVerified email at cwi.nl
Celine ScornavaccaInstitut des Sciences de l'Evolution, MontpellierVerified email at umontpellier.fr
Remie Janssenformer PhD student, TU DelftVerified email at tudelft.nl
Yukihiro MurakamiAssistant Professor, TU DelftVerified email at tudelft.nl
Gunnar W. KlauHeinrich Heine University DüsseldorfVerified email at hhu.de
Nela LekicPhD candidate, Maastricht UniversityVerified email at maastrichtuniversity.nl
teun boekhoutCBS Fungal Biodiversity CentreVerified email at cbs.knaw.nl
Ferry HagenGroup Leader / Medical Molecular MicrobiologistVerified email at wi.knaw.nl
Prof. Mike SteelUniversity of Canterbury, New ZealandVerified email at canterbury.ac.nz
Alexander SchönhuthSenior Researcher, Centrum Wiskunde & Informatica, AmsterdamVerified email at cwi.nl
Nadia PisantiUniversity of Pisa & Erable Team INRIAVerified email at di.unipi.it
Murray PattersonAssistant Professor, Georgia State UniversityVerified email at cs.gsu.edu
taoyang wuLecturer of Computational Biology, University of East AngliaVerified email at uea.ac.uk
Norbert ZehProfessor of Computer Science, Dalhousie UniversityVerified email at cs.dal.ca
Tobias MarschallHeinrich Heine University DüsseldorfVerified email at hhu.de
Charles SempleProfessor of Mathematics, University of CanterburyVerified email at canterbury.ac.nz
Simone LinzSenior Lecturer, School of Computer Science, University of Auckland, New ZealandVerified email at auckland.ac.nz
James McInerneyChair in Evolutionary Biology, University of NottinghamVerified email at nottingham.ac.uk
Luay NakhlehProfessor of Computer Science, Rice UniversityVerified email at rice.edu

Leo van Iersel

Associate professor, TU Delft

Verified email at tudelft.nl - Homepage

algorithms computational biology phylogenetics graphs


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WhatsHap: Weighted Haplotype Assembly for Future-Generation Sequencing Reads M Patterson, T Marschall, N Pisanti, L Van Iersel, L Stougie, GW Klau, ... Journal of Computational Biology 22 (6), 498-509, 2015	256	2015
Networks: expanding evolutionary thinking E Bapteste, L van Iersel, A Janke, S Kelchner, S Kelk, JO McInerney, ... Trends in Genetics 29 (8), 439-441, 2013	175	2013
Ancient Dispersal of the Human Fungal Pathogen Cryptococcus gattii from the Amazon Rainforest F Hagen, PC Ceresini, I Polacheck, H Ma, F Nieuwerburgh, T Gabaldón, ... PloS one 8 (8), e71148, 2013	150	2013
Geographically structured populations of Cryptococcus neoformans variety grubii in Asia correlate with HIV status and show a clonal population structure K Khayhan, F Hagen, W Pan, S Simwami, MC Fisher, R Wahyuningsih, ... PLoS One 8 (9), e72222, 2013	95	2013
On the complexity of several haplotyping problems R Cilibrasi, L Van Iersel, S Kelk, J Tromp International Workshop on Algorithms in Bioinformatics, 128-139, 2005	95	2005
Locating a tree in a phylogenetic network L Van Iersel, C Semple, M Steel Information Processing Letters 110 (23), 1037-1043, 2010	82	2010
Phylogenetic networks do not need to be complex: using fewer reticulations to represent conflicting clusters L Van Iersel, S Kelk, R Rupp, D Huson Bioinformatics 26 (12), i124-i131, 2010	69	2010
The complexity of the single individual SNP haplotyping problem R Cilibrasi, L Van Iersel, S Kelk, J Tromp Algorithmica 49 (1), 13-36, 2007	69	2007
Constructing the simplest possible phylogenetic network from triplets L van Iersel, S Kelk Algorithmica 60 (2), 207-235, 2011	63	2011
Constructing level-2 phylogenetic networks from triplets L Van Iersel, J Keijsper, S Kelk, L Stougie, F Hagen, T Boekhout Computational Biology and Bioinformatics, IEEE/ACM Transactions on 6 (4 …, 2009	62	2009
Every ternary permutation constraint satisfaction problem parameterized above average has a kernel with a quadratic number of variables G Gutin, L van Iersel, M Mnich, A Yeo Journal of Computer and System Sciences, 2011	51	2011
Nonbinary tree-based phylogenetic networks L Jetten, L van Iersel IEEE/ACM transactions on computational biology and bioinformatics 15 (1 …, 2016	44	2016
Trinets encode tree-child and level-2 phylogenetic networks L Van Iersel, V Moulton Journal of mathematical biology 68 (7), 1707-1729, 2014	43	2014
WhatsHap: Haplotype Assembly for Future-Generation Sequencing Reads M Patterson, T Marschall, N Pisanti, L van Iersel, L Stougie, GW Klau, ... International Conference on Research in Computational Molecular Biology, 237-249, 2014	42	2014
Uniqueness, intractability and exact algorithms: reflections on level-k phylogenetic networks L Van Iersel, S Kelk, M Mnich Journal of Bioinformatics and Computational Biology 7 (04), 597-623, 2009	42	2009
Constructing level-2 phylogenetic networks from triplets L Van Iersel, J Keijsper, S Kelk, L Stougie, F Hagen, T Boekhout Annual International Conference on Research in Computational Molecular …, 2008	36	2008
How much information is needed to infer reticulate evolutionary histories? KT Huber, L Van Iersel, V Moulton, T Wu Systematic Biology 64 (1), 102-111, 2015	33	2015
When two trees go to war L van Iersel, S Kelk Journal of Theoretical Biology, 2010	32	2010
A practical algorithm for reconstructing level-1 phylogenetic networks KT Huber, L Van Iersel, S Kelk, R Suchecki IEEE/ACM Transactions on Computational Biology and Bioinformatics 8 (3), 635-649, 2010	32	2010
Reconstructing phylogenetic level-1 networks from nondense binet and trinet sets KT Huber, L Van Iersel, V Moulton, C Scornavacca, T Wu Algorithmica 77, 173-200, 2017	29	2017

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