Niche-specific reprogramming of epigenetic landscapes drives myeloid cell diversity in nonalcoholic steatohepatitis JS Seidman, TD Troutman, M Sakai, A Gola, NJ Spann, H Bennett, ... Immunity 52 (6), 1057-1074. e7, 2020 | 330 | 2020 |
Heterogeneity of HSC s in a Mouse Model of NASH SB Rosenthal, X Liu, S Ganguly, D Dhar, MP Pasillas, E Ricciardelli, RZ Li, ... Hepatology 74 (2), 667-685, 2021 | 97 | 2021 |
Metabolomic Analysis of Liver Tissues for Characterization of Hepatocellular Carcinoma A Ferrarini, C Di Poto, S He, C Tu, RS Varghese, A Kara Balla, ... Journal of proteome research 18 (8), 3067-3076, 2019 | 71 | 2019 |
Klotho gene silencing promotes pathology in the mdx mouse model of Duchenne muscular dystrophy M Wehling-Henricks, Z Li, C Lindsey, Y Wang, SS Welc, JN Ramos, ... Human molecular genetics 25 (12), 2465-2482, 2016 | 55 | 2016 |
Tracking Functional Tumor Cell Subpopulations of Malignant Glioma by Phasor Fluorescence Lifetime Imaging Microscopy of NADH AL Trinh, H Chen, Y Chen, Y Hu, Z Li, ER Siegel, ME Linskey, PH Wang, ... Cancers 9 (12), 168, 2017 | 40 | 2017 |
DNA methyltransferase 3 alpha and TET methylcytosine dioxygenase 2 restrain mitochondrial DNA-mediated interferon signaling in macrophages I Cobo, TN Tanaka, KC Mangalhara, A Lana, C Yeang, C Han, ... Immunity 55 (8), 1386-1401. e10, 2022 | 38 | 2022 |
Tumor-specific chromosome mis-segregation controls cancer plasticity by maintaining tumor heterogeneity Y Hu, N Ru, H Xiao, A Chaturbedi, NT Hoa, XJ Tian, H Zhang, C Ke, ... PLoS One 8 (11), e80898, 2013 | 33 | 2013 |
Genome-Wide DNA Methylation Analysis Reveals Epigenetic Pattern of SH2B1 in Chinese Monozygotic Twins Discordant for Autism Spectrum Disorder S Liang, Z Li, Y Wang, X Li, X Yang, X Zhan, Y Huang, Z Gao, M Zhang, ... Frontiers in neuroscience 13, 712, 2019 | 24 | 2019 |
Human microglia maturation is underpinned by specific gene regulatory networks CZ Han, RZ Li, E Hansen, S Trescott, BR Fixsen, CT Nguyen, CM Mora, ... Immunity 56 (9), 2152-2171. e13, 2023 | 17 | 2023 |
Weaponizing human EGF-containing fibulin-like extracellular matrix protein 1 (EFEMP1) for 21st century cancer therapeutics YH Zhou, Y Hu, L Yu, C Ke, C Vo, H Hsu, Z Li, AT Di Donato, ... Oncoscience 3 (7-8), 208, 2016 | 15 | 2016 |
Systematic analysis of naturally occurring insertions and deletions that alter transcription factor spacing identifies tolerant and sensitive transcription factor pairs Z Shen, RZ Li, TA Prohaska, MA Hoeksema, NJ Spann, J Tao, ... Elife 11, e70878, 2022 | 13 | 2022 |
Discovery of potential urine-accessible metabolite biomarkers associated with muscle disease and corticosteroid response in the mdx mouse model for Duchenne M Thangarajh, A Zhang, K Gill, HW Ressom, Z Li, RS Varghese, ... PloS one 14 (7), e0219507, 2019 | 7 | 2019 |
INDEED: R package for network based differential expression analysis Z Li, Y Zuo, C Xu, RS Varghese, HW Ressom 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2018 | 7 | 2018 |
Efemp1 attenuates Egfr signaling activities and the prognostic effect of Efemp1depends on the level of Egfr expression in gliomas Y Hu, C Vo, Z Li, C Ke, N Ru, KR Hess, ME Linskey, YH Zhou NEURO-ONCOLOGY 15, 18-18, 2013 | 1 | 2013 |
TIANA: transcription factors cooperativity inference analysis with neural attention RZ Li, CZ Han, CK Glass BMC bioinformatics 25 (1), 274, 2024 | | 2024 |
Deciphering genomic grammar of regulatory sequences RZ Li | | 2023 |
264 Interrogating altered enhancer landscapes to decode pathogenic changes in macrophages during chronic inflammatory disease J Seidman, T Troutman, M Sakai, R Li, Z Ouyang, N Spann, H Bennett, ... Journal of Investigative Dermatology 140 (7), S32, 2020 | | 2020 |