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Atanu Acharya
Atanu Acharya
Syracuse University. Former affiliations: Georgia Tech, Yale University, and USC
Verified email at syr.edu - Homepage
Title
Cited by
Cited by
Year
Photoinduced Chemistry in Fluorescent Proteins: Curse or Blessing?
A Acharya, AM Bogdanov, BL Grigorenko, KB Bravaya, AV Nemukhin, ...
Chemical Reviews 117 (2), 758-795, 2017
2372017
Supercomputer-based ensemble docking drug discovery pipeline with application to COVID-19
A Acharya, R Agarwal, MB Baker, J Baudry, D Bhowmik, S Boehm, ...
Journal of chemical information and modeling 60 (12), 5832-5852, 2020
1562020
Electric field stimulates production of highly conductive microbial OmcZ nanowires
SE Yalcin, JP O’Brien, Y Gu, K Reiss, SM Yi, R Jain, V Srikanth, PJ Dahl, ...
Nature chemical biology 16 (10), 1136-1142, 2020
1222020
Phenothiazine Radical Cation Excited States as Super-oxidants for Energy-Demanding Reactions
JA Christensen, BT Phelan, S Chaudhuri, A Acharya, VS Batista, ...
Journal of the American Chemical Society 140 (15), 5290-5299, 2018
1092018
Extension of the effective fragment potential method to macromolecules
PK Gurunathan, A Acharya, D Ghosh, D Kosenkov, I Kaliman, Y Shao, ...
The Journal of Physical Chemistry B 120 (27), 6562-6574, 2016
912016
Allosteric Motions of the CRISPR-Cas9 HNH Nuclease Probed by NMR and Molecular Dynamics
KW East, JC Newton, UN Morzan, Y Narkhede, A Acharya, E Skeens, ...
Journal of the American Chemical Society, 2020
812020
Turning On and Off Photoinduced Electron Transfer in Fluorescent Proteins by π-Stacking, Halide Binding, and Tyr145 Mutations
AM Bogdanov, A Acharya, AV Titelmayer, AV Mamontova, KB Bravaya, ...
Journal of American Chemical Society 138 (14), 4807–4817, 2016
622016
Inhibitor binding influences the protonation states of histidines in SARS-CoV-2 main protease
A Pavlova, DL Lynch, I Daidone, L Zanetti-Polzi, MD Smith, C Chipot, ...
Chemical Science 12 (4), 1513-1527, 2021
592021
Machine Learning Reveals the Critical Interactions for SARS-CoV-2 Spike Protein Binding to ACE2
A Pavlova, Z Zhang, A Acharya, DL Lynch, YT Pang, Z Mou, JM Parks, ...
The Journal of Physical Chemistry Letters 12, 5494-5502, 2021
502021
SARS-CoV-2 spike opening dynamics and energetics reveal the individual roles of glycans and their collective impact
YT Pang, A Acharya, DL Lynch, A Pavlova, JC Gumbart
Communications biology 5 (1), 1-11, 2022
392022
A 300-fold conductivity increase in microbial cytochrome nanowires due to temperature-induced restructuring of hydrogen bonding networks
PJ Dahl, SM Yi, Y Gu, A Acharya, C Shipps, J Neu, JP O’Brien, ...
Science Advances 8 (19), eabm7193, 2022
322022
Can TDDFT Describe Excited Electronic States of Naphthol Photoacids? A Closer Look with EOM-CCSD
A Acharya, S Chaudhuri, VS Batista
Journal of Chemical Theory and Computation 14 (2), 867-876, 2018
302018
ACE2 glycans preferentially interact with SARS-CoV-2 over SARS-CoV
A Acharya, DL Lynch, A Pavlova, YT Pang, JC Gumbart
Chemical Communications, 2021
232021
Toward Understanding the Redox Properties of Model Chromophores from the Green Fluorescent Protein Family: An Interplay between Conjugation, Resonance Stabilization, and …
D Ghosh, A Acharya, SC Tiwari, AI Krylov
The Journal of Physical Chemistry B 116 (41), 12398-12405, 2012
222012
The Effect of (-)-epigallocatechin-3-gallate on the Amyloid-β Secondary Structure
A Acharya, J Stockmann, L Beyer, T Rudack, A Nabers, JC Gumbart, ...
Biophysical Journal 119, 2020
212020
Influence of the First Chromophore-Forming Residue on Photobleaching and Oxidative Photoconversion of EGFP and EYFP
T Sen, AV Mamontova, AV Titelmayer, AM Shakhov, AA Astafiev, ...
International Journal of Molecular Sciences 20 (20), 5229, 2019
152019
Restoring and Enhancing the Potency of Existing Antibiotics against Drug-Resistant Gram-Negative Bacteria through the Development of Potent Small-Molecule Adjuvants
B Yu, M Roy Choudhury, X Yang, SL Benoit, E Womack, ...
ACS Infectious Diseases 8 (8), 1491-1508, 2022
112022
Proton transfer activity of the reconstituted Mycobacterium tuberculosis MmpL3 is modulated by substrate mimics and inhibitors
CM Stevens, SO Babii, AN Pandya, W Li, Y Li, J Mehla, R Scott, P Hegde, ...
Proceedings of the National Academy of Sciences 119 (30), e2113963119, 2022
102022
Gatekeeping Ketosynthases Dictate Initiation of Assembly Line Biosynthesis of Pyrrolic Polyketides
D Yi, A Acharya, JC Gumbart, WR Gutekunst, V Agarwal
Journal of the American Chemical Society 143 (20), 7617-7622, 2021
102021
Regioselective Ultrafast Photoinduced Electron Transfer from Naphthols to Halocarbon Solvents
S Chaudhuri, A Acharya, E Nibbering, VS Batista
J. Phys. Chem. Lett. 10, 2657–2662, 2019
102019
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Articles 1–20