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swati bhattacharya
swati bhattacharya
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Title
Cited by
Cited by
Year
Modeling and simulation of ion channels
C Maffeo, S Bhattacharya, J Yoo, D Wells, A Aksimentiev
Chemical reviews 112 (12), 6250, 2012
2392012
Nanopore analysis of individual RNA/antibiotic complexes
M Wanunu, S Bhattacharya, Y Xie, Y Tor, A Aksimentiev, M Drndic
Acs Nano 5 (12), 9345-9353, 2011
902011
Rectification of the current in alpha-hemolysin pore depends on the cation type: the alkali series probed by MD simulations and experiments
S Bhattacharya, L Muzard, L Payet, J Mathé, U Bockelmann, ...
The journal of physical chemistry. C, Nanomaterials and interfaces 115 (10 …, 2011
89*2011
Molecular Dynamics Study of MspA Arginine-Mutants Predicts Slow DNA Translocations and Ion Current Blockades Indicative of DNA Sequence
S Bhattacharya, IM Derrington, M Pavlenok, M Niederweis, JH Gundlach, ...
ACS nano 6 (8), 6960, 2012
862012
Water mediates recognition of DNA sequence via ionic current blockade in a biological nanopore
S Bhattacharya, J Yoo, A Aksimentiev
ACS nano 10 (4), 4644, 2016
522016
Forced-Induced Desorption of a Polymer Chain Adsorbed on an Attractive Surface: Theory and Computer Experiment
S Bhattacharya, VG Rostiashvili, A Milchev, TA Vilgis
Macromolecules 42 (6), 2236-2250, 2009
402009
Adsorption of multiblock and random copolymer on a solid surface: Critical behavior and phase diagram
S Bhattacharya, HP Hsu, A Milchev, VG Rostiashvili, TA Vilgis
Macromolecules 41 (8), 2920-2930, 2008
342008
Polymer desorption under pulling: A dichotomic phase transition
S Bhattacharya, VG Rostiashvili, A Milchev, TA Vilgis
Physical Review E 79 (3), 030802, 2009
262009
Adsorption kinetics of a single polymer on a solid plane
S Bhattacharya, A Milchev, VG Rostiashvili, AY Grosberg, TA Vilgis
Physical Review E 77 (6), 061603, 2008
242008
Optimization of the molecular dynamics method for simulations of DNA and ion transport through biological nanopores
DB Wells, S Bhattacharya, R Carr, C Maffeo, A Ho, J Comer, ...
Nanopore-Based Technology, 165-186, 2012
232012
Pulling an adsorbed polymer chain off a solid surface
S Bhattacharya, A Milchev, VG Rostiashvili, TA Vilgis
The European Physical Journal E: Soft Matter and Biological Physics 29 (3 …, 2009
222009
Uncertainty in a Markov state model with missing states and rates: Application to a room temperature kinetic model obtained using high temperature molecular dynamics
A Chatterjee, S Bhattacharya
Journal of Chemical Physics, 2015
192015
Uncovering allostery and regulation in SAMHD1 through molecular dynamics simulations
KK Patra, A Bhattacharya, S Bhattacharya
Proteins: Structure, Function, and Bioinformatics 85 (7), 1266-1275, 2017
162017
A new class of enhanced kinetic sampling methods for building Markov state models
AC A. Bhoutekar, S. Ghosh, S. Bhattacharya
Journal of Chemical Physics 147, 152702, 2017
142017
Molecular dynamics investigation of a redox switch in the anti‐HIV protein SAMHD1
KK Patra, A Bhattacharya, S Bhattacharya
Proteins: Structure, Function, and Bioinformatics 87 (9), 748-759, 2019
102019
Time-Dependent Markov State Models for Single Molecule Force Spectroscopy
S Ghosh, A Chatterjee, S Bhattacharya
Journal of chemical theory and computation 13 (3), 957-962, 2017
92017
Allosteric Signal Transduction in HIV-1 Restriction Factor SAMHD1 Proceeds via Reciprocal Handshake across Monomers
KK Patra, A Bhattacharya, S Bhattacharya
Journal of Chemical Information and Modeling 57 (10), 2523-2538, 2017
82017
Polymer chain adsorption on a solid surface: scaling arguments and computer simulations
A Milchev, V Rostiashvili, S Bhattacharya, T Vilgis
Nanophenomena at Surfaces: Fundamentals of Exotic Condensed Matter …, 2011
82011
Probing the energy landscape of alanine dipeptide and decalanine using temperature as a tunable parameter in molecular dynamics
A Chatterjee, S Bhattacharya
Journal of Physics: Conference Series 759 (1), 012024, 2016
62016
Nanopore-based technology: single molecule characterization and DNA sequencing
DB Wells, S Bhattacharya, R Carr, C Maffeo, A Ho, J Comer, ...
Humana Press, 2011
62011
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