| Computational analysis of cell-to-cell heterogeneity in single-cell RNA-sequencing data reveals hidden subpopulations of cells F Buettner, KN Natarajan, FP Casale, V Proserpio, A Scialdone, FJ Theis, ... Nature biotechnology 33 (2), 155-160, 2015 | 1268 | 2015 |
| Diffusion pseudotime robustly reconstructs lineage branching L Haghverdi, M Büttner, FA Wolf, F Buettner, FJ Theis Nature methods 13 (10), 845-848, 2016 | 1253 | 2016 |
| Multi‐Omics Factor Analysis—a framework for unsupervised integration of multi‐omics data sets R Argelaguet, B Velten, D Arnol, S Dietrich, T Zenz, JC Marioni, F Buettner, ... Molecular systems biology 14 (6), e8124, 2018 | 927 | 2018 |
| Diffusion maps for high-dimensional single-cell analysis of differentiation data L Haghverdi, F Buettner, FJ Theis Bioinformatics 31 (18), 2989-2998, 2015 | 662 | 2015 |
| destiny: diffusion maps for large-scale single-cell data in R P Angerer, L Haghverdi, M Büttner, FJ Theis, C Marr, F Buettner Bioinformatics 32 (8), 1241-1243, 2016 | 585 | 2016 |
| Combined single-cell functional and gene expression analysis resolves heterogeneity within stem cell populations NK Wilson, DG Kent, F Buettner, M Shehata, IC Macaulay, ... Cell stem cell 16 (6), 712-724, 2015 | 500 | 2015 |
| Vitamin A-retinoic acid signaling regulates hematopoietic stem cell dormancy N Cabezas-Wallscheid, F Buettner, P Sommerkamp, D Klimmeck, L Ladel, ... Cell 169 (5), 807-823. e19, 2017 | 449 | 2017 |
| Decoding the regulatory network of early blood development from single-cell gene expression measurements V Moignard, S Woodhouse, L Haghverdi, AJ Lilly, Y Tanaka, ... Nature biotechnology 33 (3), 269-276, 2015 | 436 | 2015 |
| Multi-omics profiling of mouse gastrulation at single-cell resolution R Argelaguet, SJ Clark, H Mohammed, LC Stapel, C Krueger, ... Nature 576 (7787), 487-491, 2019 | 393 | 2019 |
| Computational assignment of cell-cycle stage from single-cell transcriptome data A Scialdone, KN Natarajan, LR Saraiva, V Proserpio, SA Teichmann, ... Methods 85, 54-61, 2015 | 389 | 2015 |
| Characterization of transcriptional networks in blood stem and progenitor cells using high-throughput single-cell gene expression analysis V Moignard, IC Macaulay, G Swiers, F Buettner, J Schütte, ... Nature cell biology 15 (4), 363-372, 2013 | 352 | 2013 |
| Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression ASE Cuomo, DD Seaton, DJ McCarthy, I Martinez, MJ Bonder, ... Nature communications 11 (1), 810, 2020 | 262 | 2020 |
| Metrics reloaded: recommendations for image analysis validation L Maier-Hein, A Reinke, P Godau, MD Tizabi, F Buettner, E Christodoulou, ... Nature methods 21 (2), 195-212, 2024 | 226* | 2024 |
| Effects of high-dose oral insulin on immune responses in children at high risk for type 1 diabetes: the Pre-POINT randomized clinical trial E Bonifacio, AG Ziegler, G Klingensmith, E Schober, PJ Bingley, ... Jama 313 (15), 1541-1549, 2015 | 226 | 2015 |
| Prospective identification of hematopoietic lineage choice by deep learning F Buggenthin, F Buettner, PS Hoppe, M Endele, M Kroiss, M Strasser, ... Nature methods 14 (4), 403-406, 2017 | 200 | 2017 |
| Common limitations of image processing metrics: A picture story A Reinke, MD Tizabi, CH Sudre, M Eisenmann, T Rädsch, M Baumgartner, ... arXiv preprint arXiv:2104.05642, 2021 | 175 | 2021 |
| Feature ranking of type 1 diabetes susceptibility genes improves prediction of type 1 diabetes C Winkler, J Krumsiek, F Buettner, C Angermüller, EZ Giannopoulou, ... Diabetologia 57, 2521-2529, 2014 | 170 | 2014 |
| Inflammatory fibroblasts mediate resistance to neoadjuvant therapy in rectal cancer AM Nicolas, M Pesic, E Engel, PK Ziegler, M Diefenhardt, KB Kennel, ... Cancer cell 40 (2), 168-184. e13, 2022 | 169 | 2022 |
| Design and selection of machine learning methods using radiomics and dosiomics for normal tissue complication probability modeling of xerostomia HS Gabryś, F Buettner, F Sterzing, H Hauswald, M Bangert Frontiers in Oncology 8, 35, 2018 | 152 | 2018 |
| f-scLVM: scalable and versatile factor analysis for single-cell RNA-seq F Buettner, N Pratanwanich, DJ McCarthy, JC Marioni, O Stegle Genome biology 18, 1-13, 2017 | 136 | 2017 |
Fabian J TheisHelmholtz Munich, Technical University of MunichVerified email at helmholtz-muenchen.de
