Computational analysis of cell-to-cell heterogeneity in single-cell RNA-sequencing data reveals hidden subpopulations of cells F Buettner, KN Natarajan, FP Casale, V Proserpio, A Scialdone, FJ Theis, ... Nature biotechnology 33 (2), 155-160, 2015 | 1168 | 2015 |
Diffusion pseudotime robustly reconstructs lineage branching L Haghverdi, M Büttner, FA Wolf, F Buettner, FJ Theis Nature methods 13 (10), 845-848, 2016 | 1079 | 2016 |
Multi‐Omics Factor Analysis—a framework for unsupervised integration of multi‐omics data sets R Argelaguet, B Velten, D Arnol, S Dietrich, T Zenz, JC Marioni, F Buettner, ... Molecular systems biology 14 (6), e8124, 2018 | 723 | 2018 |
Diffusion maps for high-dimensional single-cell analysis of differentiation data L Haghverdi, F Buettner, FJ Theis Bioinformatics 31 (18), 2989-2998, 2015 | 603 | 2015 |
destiny: diffusion maps for large-scale single-cell data in R P Angerer, L Haghverdi, M Büttner, FJ Theis, C Marr, F Buettner Bioinformatics 32 (8), 1241-1243, 2016 | 511 | 2016 |
Combined single-cell functional and gene expression analysis resolves heterogeneity within stem cell populations NK Wilson, DG Kent, F Buettner, M Shehata, IC Macaulay, ... Cell stem cell 16 (6), 712-724, 2015 | 457 | 2015 |
Decoding the regulatory network of early blood development from single-cell gene expression measurements V Moignard, S Woodhouse, L Haghverdi, AJ Lilly, Y Tanaka, ... Nature biotechnology 33 (3), 269-276, 2015 | 414 | 2015 |
Vitamin A-retinoic acid signaling regulates hematopoietic stem cell dormancy N Cabezas-Wallscheid, F Buettner, P Sommerkamp, D Klimmeck, L Ladel, ... Cell 169 (5), 807-823. e19, 2017 | 391 | 2017 |
Computational assignment of cell-cycle stage from single-cell transcriptome data A Scialdone, KN Natarajan, LR Saraiva, V Proserpio, SA Teichmann, ... Methods 85, 54-61, 2015 | 363 | 2015 |
Characterization of transcriptional networks in blood stem and progenitor cells using high-throughput single-cell gene expression analysis V Moignard, IC Macaulay, G Swiers, F Buettner, J Schütte, ... Nature cell biology 15 (4), 363-372, 2013 | 339 | 2013 |
Multi-omics profiling of mouse gastrulation at single-cell resolution R Argelaguet, SJ Clark, H Mohammed, LC Stapel, C Krueger, ... Nature 576 (7787), 487-491, 2019 | 328 | 2019 |
Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression ASE Cuomo, DD Seaton, DJ McCarthy, I Martinez, MJ Bonder, ... Nature communications 11 (1), 810, 2020 | 213 | 2020 |
Effects of high-dose oral insulin on immune responses in children at high risk for type 1 diabetes: the Pre-POINT randomized clinical trial E Bonifacio, AG Ziegler, G Klingensmith, E Schober, PJ Bingley, ... Jama 313 (15), 1541-1549, 2015 | 201 | 2015 |
Prospective identification of hematopoietic lineage choice by deep learning F Buggenthin, F Buettner, PS Hoppe, M Endele, M Kroiss, M Strasser, ... Nature methods 14 (4), 403-406, 2017 | 181 | 2017 |
Feature ranking of type 1 diabetes susceptibility genes improves prediction of type 1 diabetes C Winkler, J Krumsiek, F Buettner, C Angermüller, EZ Giannopoulou, ... Diabetologia 57, 2521-2529, 2014 | 156 | 2014 |
Design and selection of machine learning methods using radiomics and dosiomics for normal tissue complication probability modeling of xerostomia HS Gabryś, F Buettner, F Sterzing, H Hauswald, M Bangert Frontiers in oncology 8, 35, 2018 | 124 | 2018 |
f-scLVM: scalable and versatile factor analysis for single-cell RNA-seq F Buettner, N Pratanwanich, DJ McCarthy, JC Marioni, O Stegle Genome biology 18, 1-13, 2017 | 121 | 2017 |
Single-cell transcriptomic reconstruction reveals cell cycle and multi-lineage differentiation defects in Bcl11a-deficient hematopoietic stem cells JCH Tsang, Y Yu, S Burke, F Buettner, C Wang, AA Kolodziejczyk, ... Genome biology 16 (1), 1-16, 2015 | 109 | 2015 |
Inflammatory fibroblasts mediate resistance to neoadjuvant therapy in rectal cancer AM Nicolas, M Pesic, E Engel, PK Ziegler, M Diefenhardt, KB Kennel, ... Cancer Cell 40 (2), 168-184. e13, 2022 | 108 | 2022 |
Dosimetric impact of motion in free‐breathing and gated lung radiotherapy: A 4D Monte Carlo study of intrafraction and interfraction effects J Seco, GC Sharp, Z Wu, D Gierga, F Buettner, H Paganetti Medical physics 35 (1), 356-366, 2008 | 101 | 2008 |