Modesto Orozco
Modesto Orozco
Professor of Biochemistry, Universtity of Barcelona
Verified email at
Cited by
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The tomato genome sequence provides insights into fleshy fruit evolution
S Sato, S Tabata, H Hirakawa, E Asamizu, K Shirasawa, S Isobe, ...
Nature 485 (7400), 635-641, 2012
Refinement of the AMBER force field for nucleic acids: improving the description of α/γ conformers
A Pérez, I Marchán, D Svozil, J Sponer, TE Cheatham III, CA Laughton, ...
Biophysical journal 92 (11), 3817-3829, 2007
Whole-genome sequencing identifies recurrent mutations in chronic lymphocytic leukaemia
XS Puente, M Pinyol, V Quesada, L Conde, GR Ordóñez, N Villamor, ...
Nature 475 (7354), 101-105, 2011
Exome sequencing identifies recurrent mutations of the splicing factor SF3B1 gene in chronic lymphocytic leukemia
V Quesada, L Conde, N Villamor, GR Ordóñez, P Jares, L Bassaganyas, ...
Nature genetics 44 (1), 47-52, 2012
Non-coding recurrent mutations in chronic lymphocytic leukaemia
XS Puente, S Beà, R Valdés-Mas, N Villamor, J Gutiérrez-Abril, ...
Nature 526 (7574), 519-524, 2015
Perspective on “Electrostatic interactions of a solute with a continuum. A direct utilization of ab initio molecular potentials for the prevision of solvent effects”
FJ Luque, JM López, M Orozco
Theoretical Chemistry Accounts 103 (3), 343-345, 2000
Theoretical methods for the description of the solvent effect in biomolecular systems
M Orozco, FJ Luque
Chemical Reviews 100 (11), 4187-4226, 2000
Parmbsc1: a refined force field for DNA simulations
I Ivani, PD Dans, A Noy, A Pérez, I Faustino, A Hospital, J Walther, ...
Nature methods 13 (1), 55-58, 2016
Epigenomic analysis detects widespread gene-body DNA hypomethylation in chronic lymphocytic leukemia
M Kulis, S Heath, M Bibikova, AC Queiros, A Navarro, G Clot, ...
Nature genetics 44 (11), 1236-1242, 2012
PMUT: a web-based tool for the annotation of pathological mutations on proteins
C Ferrer-Costa, JL Gelpí, L Zamakola, I Parraga, X De La Cruz, M Orozco
Bioinformatics 21 (14), 3176-3178, 2005
Molecular dynamics simulations: advances and applications
A Hospital, JR Goñi, M Orozco, JL Gelpí
Advances and applications in bioinformatics and chemistry: AABC 8, 37, 2015
Tautomerism and protonation of guanine and cytosine. Implications in the formation of hydrogen-bonded complexes
C Colominas, FJ Luque, M Orozco
Journal of the American Chemical Society 118 (29), 6811-6821, 1996
Performance of molecular mechanics force fields for RNA simulations: stability of UUCG and GNRA hairpins
P Banás, D Hollas, M Zgarbová, P Jurecka, M Orozco, TE Cheatham III, ...
Journal of Chemical Theory and Computation 6 (12), 3836-3849, 2010
Target flexibility: an emerging consideration in drug discovery and design
P Cozzini, GE Kellogg, F Spyrakis, DJ Abraham, G Costantino, A Emerson, ...
Journal of medicinal chemistry 51 (20), 6237-6255, 2008
A systematic molecular dynamics study of nearest-neighbor effects on base pair and base pair step conformations and fluctuations in B-DNA
R Lavery, K Zakrzewska, D Beveridge, TC Bishop, DA Case, ...
Nucleic acids research 38 (1), 299-313, 2010
Is polarization important in cation-π interactions?
E Cubero, FJ Luque, M Orozco
Proceedings of the National Academy of Sciences 95 (11), 5976-5980, 1998
Dynamics of B-DNA on the microsecond time scale
A Pérez, FJ Luque, M Orozco
Journal of the American Chemical Society 129 (47), 14739-14745, 2007
Hydrogen bond versus anti-hydrogen bond: a comparative analysis based on the electron density topology
E Cubero, M Orozco, P Hobza, FJ Luque
The Journal of Physical Chemistry A 103 (32), 6394-6401, 1999
A consensus view of protein dynamics
M Rueda, C Ferrer-Costa, T Meyer, A Pérez, J Camps, A Hospital, ...
Proceedings of the National Academy of Sciences 104 (3), 796-801, 2007
Characterization of disease-associated single amino acid polymorphisms in terms of sequence and structure properties
C Ferrer-Costa, M Orozco, X de la Cruz
Journal of molecular biology 315 (4), 771-786, 2002
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