Huaiyu Mi
Huaiyu Mi
Verified email at usc.edu
TitleCited byYear
The sequence of the human genome
JC Venter, MD Adams, EW Myers, PW Li, RJ Mural, GG Sutton, HO Smith, ...
science 291 (5507), 1304-1351, 2001
166382001
PANTHER: a library of protein families and subfamilies indexed by function
PD Thomas, MJ Campbell, A Kejariwal, H Mi, B Karlak, R Daverman, ...
Genome research 13 (9), 2129-2141, 2003
22432003
Large-scale gene function analysis with the PANTHER classification system
H Mi, A Muruganujan, JT Casagrande, PD Thomas
Nature protocols 8 (8), 1551, 2013
16302013
PANTHER version 11: expanded annotation data from Gene Ontology and Reactome pathways, and data analysis tool enhancements
H Mi, X Huang, A Muruganujan, H Tang, C Mills, D Kang, PD Thomas
Nucleic acids research 45 (D1), D183-D189, 2017
13532017
PANTHER in 2013: modeling the evolution of gene function, and other gene attributes, in the context of phylogenetic trees
H Mi, A Muruganujan, PD Thomas
Nucleic acids research 41 (D1), D377-D386, 2012
12452012
InterPro in 2011: new developments in the family and domain prediction database
S Hunter, P Jones, A Mitchell, R Apweiler, TK Attwood, A Bateman, ...
Nucleic acids research 40 (D1), D306-D312, 2012
10752012
The InterPro protein families database: the classification resource after 15 years
A Mitchell, HY Chang, L Daugherty, M Fraser, S Hunter, R Lopez, ...
Nucleic acids research 43 (D1), D213-D221, 2015
10372015
InterPro in 2017—beyond protein family and domain annotations
RD Finn, TK Attwood, PC Babbitt, A Bateman, P Bork, AJ Bridge, ...
Nucleic acids research 45 (D1), D190-D199, 2017
8902017
The systems biology graphical notation
N Le Novere, M Hucka, H Mi, S Moodie, F Schreiber, A Sorokin, E Demir, ...
Nature biotechnology 27 (8), 735, 2009
8002009
The PANTHER database of protein families, subfamilies, functions and pathways
H Mi, B Lazareva-Ulitsky, R Loo, A Kejariwal, J Vandergriff, S Rabkin, ...
Nucleic acids research 33 (suppl_1), D284-D288, 2005
7872005
PANTHER version 10: expanded protein families and functions, and analysis tools
H Mi, S Poudel, A Muruganujan, JT Casagrande, PD Thomas
Nucleic acids research 44 (D1), D336-D342, 2016
6882016
PANTHER: a browsable database of gene products organized by biological function, using curated protein family and subfamily classification
PD Thomas, A Kejariwal, MJ Campbell, H Mi, K Diemer, N Guo, I Ladunga, ...
Nucleic acids research 31 (1), 334-341, 2003
5802003
The BioPAX community standard for pathway data sharing
E Demir, MP Cary, S Paley, K Fukuda, C Lemer, I Vastrik, G Wu, ...
Nature biotechnology 28 (9), 935-942, 2010
5772010
PANTHER version 7: improved phylogenetic trees, orthologs and collaboration with the Gene Ontology Consortium
H Mi, Q Dong, A Muruganujan, P Gaudet, S Lewis, PD Thomas
Nucleic acids research 38 (suppl_1), D204-D210, 2010
5102010
Applications for protein sequence–function evolution data: mRNA/protein expression analysis and coding SNP scoring tools
PD Thomas, A Kejariwal, N Guo, H Mi, MJ Campbell, A Muruganujan, ...
Nucleic acids research 34 (suppl_2), W645-W650, 2006
4412006
PANTHER version 6: protein sequence and function evolution data with expanded representation of biological pathways
H Mi, N Guo, A Kejariwal, PD Thomas
Nucleic acids research 35 (suppl_1), D247-D252, 2007
3912007
The gene ontology resource: 20 years and still GOing strong
Gene Ontology Consortium
Nucleic acids research 47 (D1), D330-D338, 2019
3362019
PANTHER pathway: an ontology-based pathway database coupled with data analysis tools
H Mi, P Thomas
Protein Networks and Pathway Analysis, 123-140, 2009
3062009
InterPro in 2019: improving coverage, classification and access to protein sequence annotations
AL Mitchell, TK Attwood, PC Babbitt, M Blum, P Bork, A Bridge, SD Brown, ...
Nucleic acids research 47 (D1), D351-D360, 2019
2682019
Induction of astrocyte differentiation by endothelial cells
H Mi, H Haeberle, BA Barres
Journal of Neuroscience 21 (5), 1538-1547, 2001
2632001
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Articles 1–20