Selection bias at the heterosexual HIV-1 transmission bottleneck JM Carlson, M Schaefer, DC Monaco, R Batorsky, DT Claiborne, J Prince, ... Science 345 (6193), 1254031, 2014 | 288 | 2014 |
Differences in the selection bottleneck between modes of sexual transmission influence the genetic composition of the HIV-1 founder virus DC Tully, CB Ogilvie, RE Batorsky, DJ Bean, KA Power, M Ghebremichael, ... PLoS pathogens 12 (5), e1005619, 2016 | 110 | 2016 |
Estimate of effective recombination rate and average selection coefficient for HIV in chronic infection R Batorsky, MF Kearney, SE Palmer, F Maldarelli, IM Rouzine, JM Coffin Proceedings of the National Academy of Sciences 108 (14), 5661-5666, 2011 | 109 | 2011 |
The route of HIV escape from immune response targeting multiple sites is determined by the cost-benefit tradeoff of escape mutations R Batorsky, RA Sergeev, IM Rouzine PLoS computational biology 10 (10), e1003878, 2014 | 28 | 2014 |
Orthogonal NGS for high throughput clinical diagnostics N Chennagiri, EJ White, A Frieden, E Lopez, DS Lieber, A Nikiforov, ... Scientific Reports 6 (1), 24650, 2016 | 19 | 2016 |
Disease progression despite protective HLA expression in an HIV-infected transmission pair J Brener, A Gall, R Batorsky, L Riddell, S Buus, E Leitman, P Kellam, ... Retrovirology 12, 1-13, 2015 | 16 | 2015 |
Model with two types of CTL regulation and experiments on CTL dynamics RA Sergeev, RE Batorsky, IM Rouzine Journal of theoretical biology 263 (3), 369-384, 2010 | 15 | 2010 |
Kosakovsky Pond SL, Walker BD, Altfeld M, Carlson JM, Allen TM. 2016. Differences in the selection bottleneck between modes of sexual transmission influence the genetic … DC Tully, CB Ogilvie, RE Batorsky, DJ Bean, KA Power, M Ghebremichael, ... PLoS Pathog 12 (5), e1005619, 0 | 15 | |
Bioengineered models of Parkinson’s disease using patient-derived dopaminergic neurons exhibit distinct biological profiles in a 3D microenvironment NJ Fiore, YM Ganat, K Devkota, R Batorsky, M Lei, K Lee, LJ Cowen, ... Cellular and Molecular Life Sciences 79 (2), 78, 2022 | 14 | 2022 |
Rapid HIV disease progression following superinfection in an HLA-B* 27: 05/B* 57: 01-positive transmission recipient J Brener, A Gall, J Hurst, R Batorsky, N Lavandier, F Chen, A Edwards, ... Retrovirology 15, 1-13, 2018 | 14 | 2018 |
Neutrophils and macrophages drive TNF-induced lethality via TRIF/CD14-mediated responses HI Muendlein, WM Connolly, J Cameron, D Jetton, Z Magri, I Smirnova, ... Science immunology 7 (78), eadd0665, 2022 | 10 | 2022 |
Single cell profiling of Hofbauer cells and fetal brain microglia reveals shared programs and functions AM Ceasrine, R Batorsky, LL Shook, S Kislal, EA Bordt, BA Devlin, ... Biorxiv, 2021.12. 03.471177, 2021 | 8 | 2021 |
Surveillance of potential pathogens and antibiotic resistance in wastewater and surface water from Boston, USA and Vellore, India using long-read metagenomic sequencing ER Fuhrmeister, LE Voth-Gaeddert, A Metilda, A Tai, RE Batorsky, ... MedRxiv, 2021.04. 22.21255864, 2021 | 8 | 2021 |
Characterization of sequence contexts that favor alternative end joining at Cas9-induced double-strand breaks T Hanscom, N Woodward, R Batorsky, AJ Brown, SA Roberts, M McVey Nucleic Acids Research 50 (13), 7465-7478, 2022 | 7 | 2022 |
Interpreting the effect of vaccination on steady state infection in animals challenged with Simian immunodeficiency virus RA Sergeev, RE Batorsky, JM Coffin, IM Rouzine Journal of theoretical biology 263 (3), 385-392, 2010 | 6 | 2010 |
Chasing a moving target: Detection of mitochondrial heteroplasmy for clinical diagnostics EJ White, T Ross, E Lopez, A Nikiforov, C Gault, R Batorsky, C Darcy, ... bioRxiv, 222109, 2017 | 4 | 2017 |
A path for non-invasive glucose detection using mid-IR supercontinuum P Domachuk, M Hunter, R Batorsky, M Cronin-Golomb, FG Omenetto, ... 2008 Conference on Lasers and Electro-Optics and 2008 Conference on Quantum …, 2008 | 3 | 2008 |
Spatial transcriptomic analysis of focal and normal areas of myocyte disarray in human hypertrophic cardiomyopathy J Laird, G Perera, R Batorsky, H Wang, K Arkun, MT Chin International Journal of Molecular Sciences 24 (16), 12625, 2023 | 1 | 2023 |
4 Placental Hofbauer Cells As a Proxy Cell Type for Fetal Brain Microglia R De Guzman, R Batorsky, S Kislal, S Brigida, S Bilbo, DK Slonim, ... American Journal of Obstetrics & Gynecology 224 (2), S2-S3, 2021 | 1 | 2021 |
A VRC13-like bNAb response is associated with complex escape pathways in HIV-1 envelope VR Joshi, DT Claiborne, ML Pack, KA Power, RM Newman, R Batorsky, ... Journal of Virology, e01720-23, 2024 | | 2024 |