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Jimmy Vandel
Jimmy Vandel
Université de Lille
Verified email at univ-lille.fr
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Cited by
Year
Gene regulatory network reconstruction using Bayesian networks, the Dantzig Selector, the Lasso and their meta-analysis
M Vignes, J Vandel, D Allouche, N Ramadan-Alban, C Cierco-Ayrolles, ...
PloS one 6 (12), e29165, 2011
1312011
Hepatic molecular signatures highlight the sexual dimorphism of Non‐Alcoholic SteatoHepatitis (NASH)
J Vandel, J Dubois‐Chevalier, C Gheeraert, B Derudas, V Raverdy, ...
Hepatology, 2020
482020
Probing transcription factor combinatorics in different promoter classes and in enhancers
J Vandel, O Cassan, S Lèbre, CH Lecellier, L Bréhélin
BMC genomics 20, 1-19, 2019
332019
Probing instructions for expression regulation in gene nucleotide compositions
C Bessière, M Taha, F Petitprez, J Vandel, JM Marin, L Bréhélin, S Lèbre, ...
PLoS computational biology 14 (1), e1005921, 2018
202018
GIANT: galaxy-based tool for interactive analysis of transcriptomic data
J Vandel, C Gheeraert, B Staels, J Eeckhoute, P Lefebvre, ...
Scientific Reports 10 (1), 1-13, 2020
132020
Functional genomics uncovers the transcription factor BNC2 as required for myofibroblastic activation in fibrosis
M Bobowski-Gerard, C Boulet, FP Zummo, J Dubois-Chevalier, ...
Nature Communications 13 (1), 5324, 2022
122022
A panel of learning methods for the reconstruction of gene regulatory networks in a systems genetics context
D Allouche, C Cierco-Ayrolles, S Givry, G Guillermin, B Mangin, T Schiex, ...
Gene Network Inference: Verification of Methods for Systems Genetics Data, 9-31, 2014
122014
New local move operators for Bayesian network structure learning
J Vandel, B Mangin, S De Givry
Proceedings of PGM-12, Granada, Spain, 2012
72012
SAGA: Sparse And Geometry-Aware non-negative matrix factorization through non-linear local embedding
N Courty, X Gong, J Vandel, T Burger
Machine learning 97, 205-226, 2014
62014
Extended Bayesian scores for reconstructing gene regulatory networks
J Vandel, B Mangin, M Vignes, S de Givry
ECCS-10 workshop on graphical models for reasoning on biological systems …, 2010
52010
Apprentissage de la structure de réseaux bayésiens. Application aux données de génétique-génomique.
J Vandel
Paul Sabatier University, Toulouse, France, 2012
42012
Reconstruction quality of a biological network when its constituting elements are partially observed
V Picheny, J Vandel, M Vignes, N Villa-Vialaneix
Seventeenth International Conference on Artificial Intelligence and …, 2014
22014
Combining diabetes, sex, and menopause as meaningful clinical features associated with NASH and liver fibrosis in individuals with class II and III obesity: A retrospective …
V Raverdy, E Chatelain, G Lasailly, R Caiazzo, J Vandel, H Verkindt, ...
Obesity 31 (12), 3066-3076, 2023
12023
Modeling transcription factor combinatorics in promoters and enhancers
J Vandel, O Cassan, S Lèbre, CH Lecellier, L Brehelin
12018
Inférence de réseaux de régulation de gènes au travers de scores étendus dans les réseaux Bayésiens.
J Vandel, B Mangin, M Vignes, D Leroux, O Loudet, ML Martin-Magniette, ...
Rev. d'Intelligence Artif. 26 (6), 679-708, 2012
12012
A New Local Move Operator for Reconstructing Gene Regulatory Networks
J Vandel, S de Givry
Alessandro Dal Palu, Agostino Dovier, Andrea Formisano, 67, 2011
12011
Reconstruction de réseau de régulation de gène à l’aide de données génomiques et de données génétiques
J Vandel, S de Givry, B Mangin, M Vignes
Conférence d'Apprentissage Automatique (CAP 2010), 12 p., 2010
12010
Inférence de réseaux de régulation de genesa partir de données d’expression et de polymorphisme
J Vandel, S de Givry
JOBIM-09 workshop sur Modeles graphiques probabilistes pour l’intégration de …, 2009
12009
Time-of-day-dependent variation of the human liver transcriptome and metabolome is disrupted in MASLD
M Johanns, JT Haas, V Raverdy, J Vandel, J Chevalier-Dubois, L Guille, ...
JHEP Reports 6 (1), 100948, 2024
2024
Time-of-day-dependent variation of the hepatic transcriptome and metabolome is disrupted in non-alcoholic fatty liver disease patients
M Johanns, JT Haas, V RAVERDY, J Vandel, J Chevalier-Dubois, L Guille, ...
bioRxiv, 2023.04. 05.535334, 2023
2023
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