Follow
Zied Gaieb
Zied Gaieb
Postdoctoral Scholar
Verified email at ucsd.edu
Title
Cited by
Cited by
Year
Beyond shielding: the roles of glycans in the SARS-CoV-2 spike protein
L Casalino, Z Gaieb, JA Goldsmith, CK Hjorth, AC Dommer, AM Harbison, ...
ACS central science 6 (10), 1722-1734, 2020
8212020
Beyond Shielding: The Roles of Glycans in the SARS-CoV-2 Spike Protein
L Casalino, Z Gaieb, JA Goldsmith, CK Hjorth, AC Dommer, AM Harbison, ...
ACS Central Science, 2020
8212020
D3R Grand Challenge 2: blind prediction of protein–ligand poses, affinity rankings, and relative binding free energies
Z Gaieb, S Liu, S Gathiaka, M Chiu, H Yang, C Shao, VA Feher, ...
Journal of computer-aided molecular design 32, 1-20, 2018
1982018
A multiscale coarse-grained model of the SARS-CoV-2 virion
A Yu, AJ Pak, P He, V Monje-Galvan, L Casalino, Z Gaieb, AC Dommer, ...
Biophysical journal 120 (6), 1097-1104, 2021
1562021
AI-driven multiscale simulations illuminate mechanisms of SARS-CoV-2 spike dynamics
L Casalino, AC Dommer, Z Gaieb, EP Barros, T Sztain, SH Ahn, A Trifan, ...
The International Journal of High Performance Computing Applications 35 (5 …, 2021
1532021
D3R Grand Challenge 3: blind prediction of protein–ligand poses and affinity rankings
Z Gaieb, CD Parks, M Chiu, H Yang, C Shao, WP Walters, MH Lambert, ...
Journal of computer-aided molecular design 33, 1-18, 2019
1312019
The flexibility of ACE2 in the context of SARS-CoV-2 infection
EP Barros, L Casalino, Z Gaieb, AC Dommer, Y Wang, L Fallon, ...
Biophysical journal 120 (6), 1072-1084, 2021
1182021
D3R grand challenge 4: blind prediction of protein–ligand poses, affinity rankings, and relative binding free energies
CD Parks, Z Gaieb, M Chiu, H Yang, C Shao, WP Walters, JM Jansen, ...
Journal of computer-aided molecular design 34, 99-119, 2020
1092020
A potential interaction between the SARS-CoV-2 spike protein and nicotinic acetylcholine receptors
ASF Oliveira, AA Ibarra, I Bermudez, L Casalino, Z Gaieb, DK Shoemark, ...
Biophysical Journal 120 (6), 983-993, 2021
452021
Disease-related mutations in PI3Kγ disrupt regulatory C-terminal dynamics and reveal a path to selective inhibitors
MK Rathinaswamy, Z Gaieb, KD Fleming, C Borsari, NJ Harris, ...
Elife 10, e64691, 2021
252021
Simulations support the interaction of the SARS-CoV-2 spike protein with nicotinic acetylcholine receptors and suggest subtype specificity
ASF Oliveira, AA Ibarra, I Bermudez, L Casalino, Z Gaieb, DK Shoemark, ...
BioRxiv, 2020
232020
Comparison of commonly used solid tumor targeted gene sequencing panels for estimating tumor mutation burden shows analytical and prognostic concordance within the cancer …
N Bevins, S Sun, Z Gaieb, JA Thorson, SS Murray
Journal for Immunotherapy of Cancer 8 (1), 2020
212020
Development of Dimethylisoxazole-Attached Imidazo[1,2-a]pyridines as Potent and Selective CBP/P300 Inhibitors
A Muthengi, VK Wimalasena, HO Yosief, MJ Bikowitz, LH Sigua, T Wang, ...
Journal of Medicinal Chemistry 64 (9), 5787-5801, 2021
192021
Molecular Mechanism of Biased Ligand Conformational Changes in CC Chemokine Receptor 7
Z Gaieb, DD Lo, D Morikis
Journal of Chemical Information and Modeling 56 (9), 1808-1822, 2016
162016
Dissecting Distinct Roles of NEDDylation E1 Ligase Heterodimer APPBP1 and UBA3 Reveals Potential Evolution Process for Activation of Ubiquitin-related Pathways
DMJL Harbani Kaur Malik-Chaudhry, Zied Gaieb, Amanda Saavedra, Michael Reyes ...
Scientific Reports 8 (10108), 2018
152018
An Analysis of Proteochemometric and Conformal Prediction Machine Learning Protein-Ligand Binding Affinity Models
C Parks, Z Gaieb, RE Amaro
Frontiers in molecular biosciences 7, 93, 2020
142020
Detection of Side Chain Rearrangements Mediating the Motions of Transmembrane Helices in Molecular Dynamics Simulations of G Protein-Coupled Receptors
Z Gaieb, D Morikis
Computational and Structural Biotechnology Journal 15, 131-137, 2017
122017
AI-driven Multiscale Simulations Illuminate Mechanisms of SARS-CoV-2 Spike Dynamics, 2020
L Casalino, A Dommer, Z Gaieb, EP Barros, T Sztain, SH Ahn, A Trifan, ...
52020
Conformational heterogeneity in CCR7 undergoes transitions to specific states upon ligand binding
Z Gaieb, D Morikis
Journal of Molecular Graphics and Modelling 74, 352-358, 2017
52017
Electrostatic Interactions between Complement Regulator CD46 (SCR1-2) and Adenovirus Ad11/Ad21 Fiber Protein Knob
CZ Chen, RD Gorham, Z Gaieb, D Morikis
Molecular biology international 2015, 2015
42015
The system can't perform the operation now. Try again later.
Articles 1–20