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Sebastian Krautwurst
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Direct RNA nanopore sequencing of full-length coronavirus genomes provides novel insights into structural variants and enables modification analysis
A Viehweger, S Krautwurst, K Lamkiewicz, R Madhugiri, J Ziebuhr, ...
Genome research 29 (9), 1545-1554, 2019
2342019
poreCov-An Easy to Use, Fast, and Robust Workflow for SARS-CoV-2 Genome Reconstruction via Nanopore Sequencing
C Brandt, S Krautwurst, R Spott, M Lohde, M Jundzill, M Marquet, ...
Frontiers in Genetics 12, 711437, 2021
342021
Distributed representations of protein domains and genomes and their compositionality
A Viehweger, S Krautwurst, B König, M Marz
bioRxiv, 524280, 2019
14*2019
Assembling highly repetitive Xanthomonas TALomes using Oxford Nanopore sequencing
A Erkes, RP Grove, M Žarković, S Krautwurst, R Koebnik, RD Morgan, ...
BMC genomics 24 (1), 151, 2023
72023
A comprehensive annotation and differential expression analysis of short and long non-coding RNAs in 16 bat genomes
NF Mostajo, M Lataretu, S Krautwurst, F Mock, D Desirò, K Lamkiewicz, ...
NAR genomics and bioinformatics 2 (1), lqz006, 2020
42020
Small RNAs direct attack and defense mechanisms in a quorum sensing phage and its host
M Sprenger, M Siemers, S Krautwurst, K Papenfort
Cell Host & Microbe 32 (5), 727-738. e6, 2024
12024
Prediction of Antibiotic Susceptibility Profiles of Vibrio cholerae Isolates From Whole Genome Illumina and Nanopore Sequencing Data: CholerAegon
V Fuesslin, S Krautwurst, A Srivastava, D Winter, B Liedigk, T Thye, ...
Frontiers in Microbiology 13, 909692, 2022
12022
Direct RNA Sequencing for Complete Viral Genomes
S Krautwurst, R Dijkman, V Thiel, A Krumbholz, M Marz
Virus Bioinformatics, 35-50, 2021
12021
Comprehensive transcriptome analysis reveals altered mRNA splicing and post-transcriptional changes in the aged mouse brain
NH Kumar, V Kluever, E Barth, S Krautwurst, M Furlan, M Pelizzola, ...
Nucleic Acids Research 52 (6), 2865-2885, 2024
2024
Targeted decontamination of sequencing data with CLEAN
M Lataretu, S Krautwurst, A Viehweger, C Brandt, M Hölzer
bioRxiv, 2023.08. 05.552089, 2023
2023
Streptomyces marispadix sp. nov., isolated from marine beach sediment
JDN Santos, IR Vitorino, N Kallscheuer, A Srivastava, S Krautwurst, ...
International Journal of Systematic and Evolutionary Microbiology 73 (7), 005956, 2023
2023
Maximizing the potential of genomic and transcriptomic studies by nanopore sequencing
D Meyer, W Goettsch, J Spangenberg, P Bohn, B Stieber, S Krautwurst, ...
bioRxiv, 2023.12. 06.570356, 2023
2023
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