| Direct RNA nanopore sequencing of full-length coronavirus genomes provides novel insights into structural variants and enables modification analysis A Viehweger, S Krautwurst, K Lamkiewicz, R Madhugiri, J Ziebuhr, ... Genome research 29 (9), 1545-1554, 2019 | 230 | 2019 |
| poreCov-An Easy to Use, Fast, and Robust Workflow for SARS-CoV-2 Genome Reconstruction via Nanopore Sequencing C Brandt, S Krautwurst, R Spott, M Lohde, M Jundzill, M Marquet, ... Frontiers in Genetics 12, 711437, 2021 | 32 | 2021 |
| Distributed representations of protein domains and genomes and their compositionality A Viehweger, S Krautwurst, B König, M Marz bioRxiv, 524280, 2019 | 14* | 2019 |
| Assembling highly repetitive Xanthomonas TALomes using Oxford Nanopore sequencing A Erkes, RP Grove, M Žarković, S Krautwurst, R Koebnik, RD Morgan, ... BMC genomics 24 (1), 151, 2023 | 5 | 2023 |
| A comprehensive annotation and differential expression analysis of short and long non-coding RNAs in 16 bat genomes NF Mostajo, M Lataretu, S Krautwurst, F Mock, D Desirò, K Lamkiewicz, ... NAR genomics and bioinformatics 2 (1), lqz006, 2020 | 4 | 2020 |
| Prediction of Antibiotic Susceptibility Profiles of Vibrio cholerae Isolates From Whole Genome Illumina and Nanopore Sequencing Data: CholerAegon V Fuesslin, S Krautwurst, A Srivastava, D Winter, B Liedigk, T Thye, ... Frontiers in Microbiology 13, 909692, 2022 | 1 | 2022 |
| Direct RNA Sequencing for Complete Viral Genomes S Krautwurst, R Dijkman, V Thiel, A Krumbholz, M Marz Virus Bioinformatics, 35-50, 2021 | 1 | 2021 |
| Comprehensive transcriptome analysis reveals altered mRNA splicing and post-transcriptional changes in the aged mouse brain NH Kumar, V Kluever, E Barth, S Krautwurst, M Furlan, M Pelizzola, ... Nucleic Acids Research 52 (6), 2865-2885, 2024 | | 2024 |
| Targeted decontamination of sequencing data with CLEAN M Lataretu, S Krautwurst, A Viehweger, C Brandt, M Hölzer bioRxiv, 2023.08. 05.552089, 2023 | | 2023 |
| Streptomyces marispadix sp. nov., isolated from marine beach sediment JDN Santos, IR Vitorino, N Kallscheuer, A Srivastava, S Krautwurst, ... International Journal of Systematic and Evolutionary Microbiology 73 (7), 005956, 2023 | | 2023 |
| Maximizing the potential of genomic and transcriptomic studies by nanopore sequencing D Meyer, W Goettsch, J Spangenberg, P Bohn, B Stieber, S Krautwurst, ... bioRxiv, 2023.12. 06.570356, 2023 | | 2023 |
| Small Rnas Direct Attack and Defence Mechanisms in a Quorum Sensing Phage and its Host M Sprenger, M Siemers, S Krautwurst, K Papenfort Available at SSRN 4650796, 0 | | |
Manja MarzRNA Bioinformatics and High-Throughput Analysis, Friedrich Schiller University Jena.Verified email at uni-jena.de
