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Sofia Duarte
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DNA barcode reference libraries for the monitoring of aquatic biota in Europe: Gap-analysis and recommendations for future work
H Weigand, AJ Beermann, F Čiampor, FO Costa, Z Csabai, S Duarte, ...
Science of the Total Environment 678, 499-524, 2019
3932019
Aquatic hyphomycete diversity and identity affect leaf litter decomposition in microcosms
S Duarte, C Pascoal, F Cássio, F Bärlocher
Oecologia 147, 658-666, 2006
2022006
DNAqua-Net: Developing new genetic tools for bioassessment and monitoring of aquatic ecosystems in Europe
F Leese, F Altermatt, A Bouchez, T Ekrem, D Hering, K Meissner, ...
Research Ideas and Outcomes 2, e11321, 2016
1622016
Why we need sustainable networks bridging countries, disciplines, cultures and generations for aquatic biomonitoring 2.0: a perspective derived from the DNAqua-Net COST action
F Leese, A Bouchez, K Abarenkov, F Altermatt, Á Borja, K Bruce, T Ekrem, ...
Advances in ecological research 58, 63-99, 2018
1602018
Copper and zinc mixtures induce shifts in microbial communities and reduce leaf litter decomposition in streams
S Duarte, C Pascoal, A Alves, A Correia, F Cássio
Freshwater Biology 53 (1), 91-101, 2008
1582008
Effects of anthropogenic heavy metal contamination on litter decomposition in streams–a meta-analysis
V Ferreira, J Koricheva, S Duarte, DK Niyogi, F Guérold
Environmental Pollution 210, 261-270, 2016
1032016
Assessing the dynamic of microbial communities during leaf decomposition in a low-order stream by microscopic and molecular techniques
S Duarte, C Pascoal, A Alves, A Correia, F Cássio
Microbiological research 165 (5), 351-362, 2010
952010
Biogeography of aquatic hyphomycetes: current knowledge and future perspectives
S Duarte, F Bärlocher, C Pascoal, F Cássio
Fungal Ecology 19, 169-181, 2016
922016
Microbial decomposer communities are mainly structured by trophic status in circumneutral and alkaline streams
S Duarte, C Pascoal, F Garabétian, F Cássio, JY Charcosset
Applied and environmental microbiology 75 (19), 6211-6221, 2009
912009
Environmental DNA metabarcoding for benthic monitoring: A review of sediment sampling and DNA extraction methods
J Pawlowski, K Bruce, K Panksep, FI Aguirre, S Amalfitano, ...
Science of The Total Environment, 151783, 2022
902022
Stream-dwelling fungal decomposer communities along a gradient of eutrophication unraveled by 454 pyrosequencing
S Duarte, F Bärlocher, J Trabulo, F Cássio, C Pascoal
Fungal Diversity 70, 127-148, 2015
892015
Effects of zinc on leaf decomposition by fungi in streams: studies in microcosms
S Duarte, C Pascoal, F Cássio
Microbial ecology 48, 366-374, 2004
802004
Differences in the sensitivity of fungi and bacteria to season and invertebrates affect leaf litter decomposition in a Mediterranean stream
J Mora-Gómez, A Elosegi, S Duarte, F Cássio, C Pascoal, AM Romaní
FEMS microbiology ecology 92 (8), fiw121, 2016
572016
High diversity of fungi may mitigate the impact of pollution on plant litter decomposition in streams
S Duarte, C Pascoal, F Cássio
Microbial ecology 56, 688-695, 2008
572008
Mixtures of zinc and phosphate affect leaf litter decomposition by aquatic fungi in streams
I Fernandes, S Duarte, F Cássio, C Pascoal
Science of the Total Environment 407 (14), 4283-4288, 2009
522009
Denaturing gradient gel electrophoresis (DGGE) in microbial ecology: insights from freshwaters
SAF Duarte, F Cássio, C Pascoal
InTech, 2012
502012
Functional stability of stream‐dwelling microbial decomposers exposed to copper and zinc stress
S Duarte, C Pascoal, F Cassio
Freshwater Biology 54 (8), 1683-1691, 2009
502009
Effects of cadmium and phenanthrene mixtures on aquatic fungi and microbially mediated leaf litter decomposition
C Moreirinha, S Duarte, C Pascoal, F Cássio
Archives of Environmental Contamination and Toxicology 61, 211-219, 2011
482011
The role of early fungal colonizers in leaf‐litter decomposition in Portuguese streams impacted by agricultural runoff
KR Sridhar, S Duarte, F Cássio, C Pascoal
International Review of Hydrobiology 94 (4), 399-409, 2009
472009
Microbial decomposition is highly sensitive to leaf litter emersion in a permanent temperate stream
J Mora-Gómez, S Duarte, F Cássio, C Pascoal, AM Romaní
Science of the Total Environment 621, 486-496, 2018
462018
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