| Gene prediction with a hidden Markov model and a new intron submodel M Stanke, S Waack Bioinformatics 19 (suppl_2), ii215-ii225, 2003 | 1242 | 2003 |
| AUGUSTUS: ab initio prediction of alternative transcripts M Stanke, O Keller, I Gunduz, A Hayes, S Waack, B Morgenstern Nucleic acids research 34 (suppl_2), W435-W439, 2006 | 1083 | 2006 |
| AUGUSTUS: a web server for gene finding in eukaryotes M Stanke, R Steinkamp, S Waack, B Morgenstern Nucleic acids research 32 (suppl_2), W309-W312, 2004 | 909 | 2004 |
| Gene prediction in eukaryotes with a generalized hidden Markov model that uses hints from external sources M Stanke, O Schöffmann, B Morgenstern, S Waack BMC bioinformatics 7 (1), 1-11, 2006 | 755 | 2006 |
| Score-based prediction of genomic islands in prokaryotic genomes using hidden Markov models S Waack, O Keller, R Asper, T Brodag, C Damm, WF Fricke, K Surovcik, ... BMC bioinformatics 7 (1), 1-12, 2006 | 339 | 2006 |
| A novel hybrid gene prediction method employing protein multiple sequence alignments O Keller, M Kollmar, M Stanke, S Waack Bioinformatics 27 (6), 757-763, 2011 | 331 | 2011 |
| Scipio: using protein sequences to determine the precise exon/intron structures of genes and their orthologs in closely related species O Keller, F Odronitz, M Stanke, M Kollmar, S Waack BMC bioinformatics 9 (1), 1-12, 2008 | 121 | 2008 |
| Calculation and optimization of thresholds for sets of software metrics S Herbold, J Grabowski, S Waack Empirical Software Engineering 16 (6), 812-841, 2011 | 93 | 2011 |
| Separating the eraser Turing machine classes Le, NLe, co-NLe and Pe M Krause, C Meinel, S Waack Theoretical Computer Science 86 (2), 267-275, 1991 | 81 | 1991 |
| Bioinformatik interaktiv R Merkl, S Waack John Wiley & Sons, 2009 | 69 | 2009 |
| Variation ranks of communication matrices and lower bounds for depth two circuits having symmetric gates with unbounded fan-in M Krause, S Waack Dekanat Informatik, Univ., 1992 | 57 | 1992 |
| Variation ranks of communication matrices and lower bounds for depth two circuits having symmetric gates with unbounded fan-in M Krause, S Waack Dekanat Informatik, Univ., 1992 | 57 | 1992 |
| Separating the eraser Turing machine classes Le, NLe, co-NLe and Pe M Krause, C Meinel, S Waack Theoretical Computer Science 86 (2), 267-275, 1991 | 54 | 1991 |
| On the descriptive and algorithmic power of parity ordered binary decision diagrams S Waack Annual Symposium on Theoretical Aspects of Computer Science, 201-212, 1997 | 51 | 1997 |
| Cross-species protein sequence and gene structure prediction with fine-tuned Webscipio 2.0 and Scipio K Hatje, O Keller, B Hammesfahr, H Pillmann, S Waack, M Kollmar BMC research notes 4 (1), 1-20, 2011 | 42 | 2011 |
| Gene prediction with a hidden Markov model. M Stanke, R Steinkamp, S Waack, B Morgenstern University of Göttingen, 2004 | 37 | 2004 |
| WebScipio: an online tool for the determination of gene structures using protein sequences F Odronitz, H Pillmann, O Keller, S Waack, M Kollmar BMC genomics 9 (1), 1-13, 2008 | 35 | 2008 |
| Improved bug reporting and reproduction through non-intrusive gui usage monitoring and automated replaying S Herbold, J Grabowski, S Waack, U Bünting 2011 IEEE Fourth International Conference on Software Testing, Verification …, 2011 | 31 | 2011 |
| Scaled dimension and nonuniform complexity JM Hitchcock, JH Lutz, E Mayordomo Journal of Computer and System Sciences 69 (2), 97-122, 2004 | 30 | 2004 |
| Lower bounds on the complexity of real-time branching programs K Kriegel, S Waack RAIRO-Theoretical Informatics and Applications 22 (4), 447-459, 1988 | 28 | 1988 |
