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Dariya Sydykova
Dariya Sydykova
Verified email at utexas.edu
Title
Cited by
Cited by
Year
Maximum allowed solvent accessibilites of residues in proteins
MZ Tien, AG Meyer, DK Sydykova, SJ Spielman, CO Wilke
PloS one 8 (11), e80635, 2013
2782013
PeptideBuilder: A simple Python library to generate model peptides
MZ Tien, DK Sydykova, AG Meyer, CO Wilke
PeerJ 1, e80, 2013
552013
Predicting evolutionary site variability from structure in viral proteins: buriedness, packing, flexibility, and design
A Shahmoradi, DK Sydykova, SJ Spielman, EL Jackson, ET Dawson, ...
Journal of molecular evolution 79 (3), 130-142, 2014
462014
Controlled Measurement and Comparative Analysis of Cellular Components in E. coli Reveals Broad Regulatory Changes in Response to Glucose Starvation
JR Houser, C Barnhart, DR Boutz, SM Carroll, A Dasgupta, JK Michener, ...
PLoS computational biology 11 (8), e1004400, 2015
382015
The E. coli molecular phenotype under different growth conditions
MU Caglar, JR Houser, CS Barnhart, DR Boutz, SM Carroll, A Dasgupta, ...
Scientific reports 7 (1), 1-15, 2017
362017
Measuring evolutionary rates of proteins in a structural context
DK Sydykova, BR Jack, SJ Spielman, CO Wilke
F1000Research 6, 2017
182017
Calculating site-specific evolutionary rates at the amino-acid or codon level yields similar rate estimates
DK Sydykova, CO Wilke
PeerJ 5, e3391, 2017
102017
Moderate amounts of epistasis are not evolutionarily stable in small populations
DK Sydykova, T LaBar, C Adami, CO Wilke
Journal of Molecular Evolution 88 (5), 435-444, 2020
32020
Theory of measurement for site-specific evolutionary rates in amino-acid sequences
DK Sydykova, CO Wilke
BioRxiv, 411025, 2018
22018
Behavior and limitations of molecular and population-level models of evolution
D Sydykova
2019
Critical level of epistasis separates trajectories toward evolution of mutational or drift robustness in small populations
C Adami, D Sydykova, T Labar, C Wilke
APS March Meeting Abstracts 2019, L70. 342, 2019
2019
context [version 2; peer review: 4 approved]
DK Sydykova, BR Jack, SJ Spielman, CO Wilke
context [version 2; peer review: 4 approved] 1000, 2018, 1845
1845
Predicting evolutionary site variability from structure in viral proteins: buriedness, flexibility, and design
A Shahmoradi, DK Sydykova, SJ Spielman, EL Jackson, ET Dawson, ...
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