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Carlos A Castaneda
Carlos A Castaneda
Syracuse University, Biology and Chemistry, Bioinspired Institute
Verified email at syr.edu - Homepage
Title
Cited by
Cited by
Year
Large shifts in pKa values of lysine residues buried inside a protein
DG Isom, CA Castañeda, BR Cannon, B García-Moreno E
Proceedings of the National Academy of Sciences 108 (13), 5260-5265, 2011
4872011
Ubiquitin modulates liquid-liquid phase separation of UBQLN2 via disruption of multivalent interactions
TP Dao, RM Kolaitis, HJ Kim, K O’Donovan, B Martyniak, E Colicino, ...
Molecular cell 69 (6), 965-978. e6, 2018
2902018
Charges in the hydrophobic interior of proteins
DG Isom, CA Castañeda, BR Cannon, PD Velu, B García-Moreno E
Proceedings of the National Academy of Sciences 107 (37), 16096-16100, 2010
2552010
Molecular determinants of the pKa values of Asp and Glu residues in staphylococcal nuclease
CA Castaneda, CA Fitch, A Majumdar, V Khangulov, JL Schlessman, ...
Proteins: Structure, Function, and Bioinformatics 77 (3), 570-588, 2009
1802009
High tolerance for ionizable residues in the hydrophobic interior of proteins
DG Isom, BR Cannon, CA Castañeda, A Robinson, B García-Moreno E
Proceedings of the National Academy of Sciences 105 (46), 17784-17788, 2008
1652008
Mapping and initial analysis of human subtelomeric sequence assemblies
H Riethman, A Ambrosini, C Castaneda, J Finklestein, XL Hu, U Mudunuri, ...
Genome research 14 (1), 18-28, 2004
1582004
The pKa values of acidic and basic residues buried at the same internal location in a protein are governed by different factors
MJ Harms, CA Castañeda, JL Schlessman, GR Sue, DG Isom, ...
Journal of molecular biology 389 (1), 34-47, 2009
1552009
Recovering a representative conformational ensemble from underdetermined macromolecular structural data
K Berlin, CA Castaneda, D Schneidman-Duhovny, A Sali, A Nava-Tudela, ...
Journal of the American Chemical Society 135 (44), 16595-16609, 2013
1202013
Nonenzymatic assembly of natural polyubiquitin chains of any linkage composition and isotopic labeling scheme
C Castañeda, J Liu, A Chaturvedi, U Nowicka, TA Cropp, D Fushman
Journal of the American Chemical Society 133 (44), 17855-17868, 2011
1012011
ALS-linked mutations affect UBQLN2 oligomerization and phase separation in a position-and amino acid-dependent manner
TP Dao, B Martyniak, AJ Canning, Y Lei, EG Colicino, MS Cosgrove, ...
Structure 27 (6), 937-951. e5, 2019
842019
DNA-damage-inducible 1 protein (Ddi1) contains an uncharacteristic ubiquitin-like domain that binds ubiquitin
U Nowicka, D Zhang, O Walker, D Krutauz, CA Castañeda, A Chaturvedi, ...
Structure 23 (3), 542-557, 2015
792015
Unique structural, dynamical, and functional properties of k11-linked polyubiquitin chains
CA Castañeda, TR Kashyap, MA Nakasone, S Krueger, D Fushman
Structure 21 (7), 1168-1181, 2013
782013
Linkage via K27 bestows ubiquitin chains with unique properties among polyubiquitins
CA Castaneda, EK Dixon, O Walker, A Chaturvedi, MA Nakasone, ...
Structure 24 (3), 423-436, 2016
642016
Linkage-specific conformational ensembles of non-canonical polyubiquitin chains
CA Castañeda, A Chaturvedi, CM Camara, JE Curtis, S Krueger, ...
Physical Chemistry Chemical Physics 18 (8), 5771-5788, 2016
632016
Direct evidence for deprotonation of a lysine side chain buried in the hydrophobic core of a protein
Y Takayama, CA Castañeda, M Chimenti, B García-Moreno, J Iwahara
Journal of the American Chemical Society 130 (21), 6714-6715, 2008
632008
Single amino acid substitutions in stickers, but not spacers, substantially alter UBQLN2 phase transitions and dense phase material properties
Y Yang, HB Jones, TP Dao, CA Castañeda
The Journal of Physical Chemistry B 123 (17), 3618-3629, 2019
612019
Structural origins of high apparent dielectric constants experienced by ionizable groups in the hydrophobic core of a protein
MS Chimenti, CA Castañeda, A Majumdar
Journal of molecular biology 405 (2), 361-377, 2011
472011
Structural and thermodynamic consequences of burial of an artificial ion pair in the hydrophobic interior of a protein
AC Robinson, CA Castañeda, JL Schlessman, B García-Moreno E
Proceedings of the National Academy of Sciences 111 (32), 11685-11690, 2014
412014
Nonenzymatic assembly of branched polyubiquitin chains for structural and biochemical studies
EK Dixon, CA Castañeda, TR Kashyap, Y Wang, D Fushman
Bioorganic & medicinal chemistry 21 (12), 3421-3429, 2013
412013
Controlled enzymatic synthesis of natural-linkage, defined-length polyubiquitin chains using lysines with removable protecting groups
CA Castañeda, J Liu, TR Kashyap, RK Singh, D Fushman, TA Cropp
Chemical communications 47 (7), 2026-2028, 2011
372011
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