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Pawel Smialowski
Pawel Smialowski
Bioinformatics
Verified email at wzw.tum.de
Title
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Cited by
Year
NeuroD1 reprograms chromatin and transcription factor landscapes to induce the neuronal program
A Pataskar, J Jung, P Smialowski, F Noack, F Calegari, T Straub, ...
The EMBO journal 35 (1), 24-45, 2016
2612016
Pitfalls of supervised feature selection
P Smialowski, D Frishman, S Kramer
Bioinformatics 26 (3), 440-443, 2010
2492010
PROSO II–a new method for protein solubility prediction
P Smialowski, G Doose, P Torkler, S Kaufmann, D Frishman
The FEBS journal 279 (12), 2192-2200, 2012
2242012
Protein solubility: sequence based prediction and experimental verification
P Smialowski, AJ Martin-Galiano, A Mikolajka, T Girschick, TA Holak, ...
Bioinformatics 23 (19), 2536-2542, 2007
2022007
Negatome 2.0: a database of non-interacting proteins derived by literature mining, manual annotation and protein structure analysis
P Blohm, G Frishman, P Smialowski, F Goebels, B Wachinger, A Ruepp, ...
Nucleic acids research 42 (D1), D396-D400, 2014
1972014
The Negatome database: a reference set of non-interacting protein pairs
P Smialowski, P Pagel, P Wong, B Brauner, I Dunger, G Fobo, G Frishman, ...
Nucleic acids research 38 (suppl_1), D540-D544, 2010
1612010
Slow exchange in the chromophore of a green fluorescent protein variant
MHJ Seifert, D Ksiazek, MK Azim, P Smialowski, N Budisa, TA Holak
Journal of the American Chemical Society 124 (27), 7932-7942, 2002
1242002
Will my protein crystallize? A sequence‐based predictor
P Smialowski, T Schmidt, J Cox, A Kirschner, D Frishman
Proteins: Structure, Function, and Bioinformatics 62 (2), 343-355, 2006
1012006
PionX sites mark the X chromosome for dosage compensation
R Villa, T Schauer, P Smialowski, T Straub, PB Becker
Nature 537 (7619), 244-248, 2016
752016
Backbone dynamics of green fluorescent protein and the effect of histidine 148 substitution
MHJ Seifert, J Georgescu, D Ksiazek, P Smialowski, T Rehm, B Steipe, ...
Biochemistry 42 (9), 2500-2512, 2003
732003
Pre-marked chromatin and transcription factor co-binding shape the pioneering activity of Foxa2
FM Cernilogar, S Hasenöder, Z Wang, K Scheibner, I Burtscher, M Sterr, ...
Nucleic Acids Research 47 (17), 9069-9086, 2019
672019
Long noncoding RNA repertoire and targeting by nuclear exosome, cytoplasmic exonuclease, and RNAi in fission yeast
SR Atkinson, S Marguerat, DA Bitton, M Rodríguez-López, C Rallis, ...
Rna 24 (9), 1195-1213, 2018
532018
Structure of the N-terminal domain of the FOP (FGFR1OP) protein and implications for its dimerization and centrosomal localization
A Mikolajka, X Yan, GM Popowicz, P Smialowski, EA Nigg, TA Holak
Journal of molecular biology 359 (4), 863-875, 2006
512006
An evolutionary and structural characterization of mammalian protein complex organization
P Wong, S Althammer, A Hildebrand, A Kirschner, P Pagel, B Geissler, ...
BMC genomics 9, 1-16, 2008
372008
Spatial centrosome proteome of human neural cells uncovers disease-relevant heterogeneity
AC O’Neill, F Uzbas, G Antognolli, F Merino, K Draganova, A Jäck, ...
Science 376 (6599), eabf9088, 2022
342022
Heterogeneity of neurons reprogrammed from spinal cord astrocytes by the proneural factors Ascl1 and Neurogenin2
J Kempf, K Knelles, BA Hersbach, D Petrik, T Riedemann, V Bednarova, ...
Cell reports 36 (3), 2021
302021
Molecular diversity of diencephalic astrocytes reveals adult astrogenesis regulated by Smad4
S Ohlig, S Clavreul, M Thorwirth, T Simon‐Ebert, R Bocchi, S Ulbricht, ...
The EMBO Journal 40 (21), e107532, 2021
272021
Predicting experimental properties of proteins from sequence by machine learning techniques
P Smialowski, AJ Martin-Galiano, J Cox, D Frishman
Current Protein and Peptide Science 8 (2), 121-133, 2007
172007
The Xenopus animal cap transcriptome: building a mucociliary epithelium
A Angerilli, P Smialowski, RAW Rupp
Nucleic acids research 46 (17), 8772-8787, 2018
162018
The Drosophila speciation factor HMR localizes to genomic insulator sites
TA Gerland, B Sun, P Smialowski, A Lukacs, AW Thomae, A Imhof
PLoS One 12 (2), e0171798, 2017
142017
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