| Using neural networks for reducing the dimensions of single-cell RNA-Seq data C Lin, S Jain, H Kim, Z Bar-Joseph Nucleic acids research 45 (17), e156-e156, 2017 | 206 | 2017 |
| Reconstructed single-cell fate trajectories define lineage plasticity windows during differentiation of human PSC-derived distal lung progenitors K Hurley, J Ding, C Villacorta-Martin, MJ Herriges, A Jacob, M Vedaie, ... Cell stem cell 26 (4), 593-608. e8, 2020 | 118 | 2020 |
| Single-cell lineage tracing by integrating CRISPR-Cas9 mutations with transcriptomic data H Zafar, C Lin, Z Bar-Joseph Nature communications 11 (1), 3055, 2020 | 55 | 2020 |
| Rule-based prediction models of cytochrome P450 inhibition BH Su, Y Tu, C Lin, CY Shao, OA Lin, YJ Tseng Journal of Chemical Information and Modeling 55 (7), 1426-1434, 2015 | 43 | 2015 |
| Continuous-state HMMs for modeling time-series single-cell RNA-Seq data C Lin, Z Bar-Joseph Bioinformatics 35 (22), 4707-4715, 2019 | 41 | 2019 |
| CypRules: a rule-based P450 inhibition prediction server CY Shao, BH Su, YS Tu, C Lin, OA Lin, YJ Tseng Bioinformatics 31 (11), 1869-1871, 2015 | 34 | 2015 |
| Cell lineage inference from SNP and scRNA-Seq data J Ding, C Lin, Z Bar-Joseph Nucleic Acids Research 47 (10), e56-e56, 2019 | 30 | 2019 |
| Inferring TF activation order in time series scRNA-Seq studies C Lin, J Ding, Z Bar-Joseph PLoS computational biology 16 (2), e1007644, 2020 | 9 | 2020 |
| An efficient computer-aided structural elucidation strategy for mixtures using an iterative dynamic programming algorithm BH Su, MY Shen, YC Harn, SY Wang, A Schurz, C Lin, OA Lin, YJ Tseng Journal of Cheminformatics 9, 1-15, 2017 | 2 | 2017 |
| Single-cell time-series mapping of cell fate trajectories reveals an expanded developmental potential for human PSC-derived distal lung progenitors K Hurley, J Ding, C Villacorta-Martin, MJ Herriges, A Jacob, M Vedaie, ... bioRxiv, 782896, 2019 | 1 | 2019 |
| Using Neural Networks to Improve Single Cell RNA-Seq Data Analysis C Lin, S Jain, H Kim, Z Bar-Joseph bioRxiv, 129759, 2017 | 1 | 2017 |
| Single-Cell Transcriptomic Analysis of Type 2 Alveolar Epithelial Cell Differentiation from Induced Pluripotent Stem Cells: An Emerging Tool to Model Interstitial Lung Diseases KJ Hurley, A Jacob, J Ding, C Lin, FJ Hawkins, C Villacorta-Martin, ... C28. PATHWAYS OF LUNG MORPHOGENESIS, A4445-A4445, 2019 | | 2019 |
| A Theoretical Summary of Cross-Validation Frameworks with Closed-From Expressions C Lin | | |
| Drug Combination Prediction Challenge C Lin, PW Wang, Y Xia, Z Bar-Joseph | | |
| Deep Adversarial 3D Shape Net C Lin, D Liu, A Kelly | | |
| Supplement to Using Neural Networks for Reducing the Dimensions of Single-Cell RNA-Seq Data C Lin, S Jain, H Kim, Z Bar-Joseph neuron 8 (3), 27, 0 | | |
Ziv Bar-JosephProfessor of Computational Biology and Machine Learning, School of Computer Science, Carnegie Mellon UniversityBestätigte E-Mail-Adresse bei andrew.cmu.edu
