| Comparative analysis of proteome and transcriptome variation in mouse A Ghazalpour, B Bennett, VA Petyuk, L Orozco, R Hagopian, IN Mungrue, ... PLoS Genet 7 (6), e1001393, 2011 | 533 | 2011 |
| Integrated proteogenomic characterization of human high-grade serous ovarian cancer H Zhang, T Liu, Z Zhang, SH Payne, B Zhang, JE McDermott, JY Zhou, ... Cell 166 (3), 755-765, 2016 | 482 | 2016 |
| DAnTE: a statistical tool for quantitative analysis of-omics data AD Polpitiya, WJ Qian, N Jaitly, VA Petyuk, JN Adkins, DG Camp, ... Bioinformatics 24 (13), 1556-1558, 2008 | 366 | 2008 |
| Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels P Mertins, F Yang, T Liu, DR Mani, VA Petyuk, MA Gillette, KR Clauser, ... Molecular & cellular proteomics 13 (7), 1690-1704, 2014 | 236 | 2014 |
| Liquid chromatography-mass spectrometry-based quantitative proteomics F Xie, T Liu, WJ Qian, VA Petyuk, RD Smith Journal of Biological Chemistry 286 (29), 25443-25449, 2011 | 187 | 2011 |
| Robust Algorithm for Alignment of Liquid Chromatography− Mass Spectrometry Analyses in an Accurate Mass and Time Tag Data Analysis Pipeline N Jaitly, ME Monroe, VA Petyuk, TRW Clauss, JN Adkins, RD Smith Analytical chemistry 78 (21), 7397-7409, 2006 | 175 | 2006 |
| Characterization of the mouse brain proteome using global proteomic analysis complemented with cysteinyl-peptide enrichment H Wang, WJ Qian, MH Chin, VA Petyuk, RC Barry, T Liu, MA Gritsenko, ... Journal of proteome research 5 (2), 361-369, 2006 | 143* | 2006 |
| Nanodroplet processing platform for deep and quantitative proteome profiling of 10–100 mammalian cells Y Zhu, PD Piehowski, R Zhao, J Chen, Y Shen, RJ Moore, AK Shukla, ... Nature communications 9 (1), 1-10, 2018 | 136 | 2018 |
| Proteogenomic analysis of human colon cancer reveals new therapeutic opportunities S Vasaikar, C Huang, X Wang, VA Petyuk, SR Savage, B Wen, Y Dou, ... Cell 177 (4), 1035-1049. e19, 2019 | 120 | 2019 |
| Sources of technical variability in quantitative LC–MS proteomics: human brain tissue sample analysis PD Piehowski, VA Petyuk, DJ Orton, F Xie, RJ Moore, ... Journal of proteome research 12 (5), 2128-2137, 2013 | 119 | 2013 |
| Label-free quantitative LC–MS proteomics of Alzheimer’s disease and normally aged human brains VP Andreev, VA Petyuk, HM Brewer, YV Karpievitch, F Xie, J Clarke, ... Journal of proteome research 11 (6), 3053-3067, 2012 | 108 | 2012 |
| Reproducible workflow for multiplexed deep-scale proteome and phosphoproteome analysis of tumor tissues by liquid chromatography–mass spectrometry P Mertins, LC Tang, K Krug, DJ Clark, MA Gritsenko, L Chen, KR Clauser, ... Nature protocols 13 (7), 1632-1661, 2018 | 97 | 2018 |
| Mitochondrial dysfunction, oxidative stress, and apoptosis revealed by proteomic and transcriptomic analyses of the striata in two mouse models of Parkinson’s disease MH Chin, WJ Qian, H Wang, VA Petyuk, JS Bloom, DM Sforza, G Lacan, ... Journal of proteome research 7 (2), 666-677, 2008 | 94 | 2008 |
| Mass spectrometry for translational proteomics: progress and clinical implications ES Baker, T Liu, VA Petyuk, KE Burnum-Johnson, YM Ibrahim, ... Genome medicine 4 (8), 63, 2012 | 80 | 2012 |
| 5′-bis-pyrenylated oligonucleotides displaying excimer fluorescence provide sensitive probes of RNA sequence and structure E Kostenko, M Dobrikov, D Pyshnyi, V Petyuk, N Komarova, V Vlassov, ... Nucleic acids research 29 (17), 3611-3620, 2001 | 79 | 2001 |
| Comprehensive identification of glycated peptides and their glycation motifs in plasma and erythrocytes of control and diabetic subjects Q Zhang, ME Monroe, AA Schepmoes, TRW Clauss, MA Gritsenko, ... Journal of proteome research 10 (7), 3076-3088, 2011 | 72 | 2011 |
| Prediction of cognition in Parkinson's disease with a clinical–genetic score: a longitudinal analysis of nine cohorts G Liu, JJ Locascio, JC Corvol, B Boot, Z Liao, K Page, D Franco, K Burke, ... The Lancet Neurology 16 (8), 620-629, 2017 | 71 | 2017 |
| Conservation of protein abundance patterns reveals the regulatory architecture of the EGFR-MAPK pathway T Shi, M Niepel, JE McDermott, Y Gao, CD Nicora, WB Chrisler, ... Science Signaling 9 (436), rs6-rs6, 2016 | 71 | 2016 |
| Large-scale proteomic analysis of Alzheimer’s disease brain and cerebrospinal fluid reveals early changes in energy metabolism associated with microglia and astrocyte activation ECB Johnson, EB Dammer, DM Duong, L Ping, M Zhou, L Yin, ... Nature medicine 26 (5), 769-780, 2020 | 67 | 2020 |
| Region-specific protein abundance changes in the brain of MPTP-induced Parkinson’s disease mouse model X Zhang, JY Zhou, MH Chin, AA Schepmoes, VA Petyuk, KK Weitz, ... Journal of proteome research 9 (3), 1496-1509, 2010 | 66 | 2010 |
Richard D SmithChief Scientist and Battelle Fellow, Biological Sciences Division, PNNLVerified email at pnnl.gov
