| Defining the consequences of genetic variation on a proteome-wide scale JM Chick, SC Munger, P Simecek, EL Huttlin, K Choi, DM Gatti, ... Nature 534 (7608), 500-505, 2016 | 345 | 2016 |
| PRDM9 Drives Evolutionary Erosion of Hotspots in Mus musculus through Haplotype-Specific Initiation of Meiotic Recombination CL Baker, S Kajita, M Walker, RL Saxl, N Raghupathy, K Choi, PM Petkov, ... PLoS genetics 11 (1), e1004916, 2015 | 155 | 2015 |
| RNA-Seq alignment to individualized genomes improves transcript abundance estimates in multiparent populations SC Munger, N Raghupathy, K Choi, AK Simons, DM Gatti, DA Hinerfeld, ... Genetics 198 (1), 59-73, 2014 | 89 | 2014 |
| Hierarchical analysis of RNA-seq reads improves the accuracy of allele-specific expression N Raghupathy, K Choi, MJ Vincent, GL Beane, KS Sheppard, SC Munger, ... Bioinformatics 34 (13), 2177-2184, 2018 | 78 | 2018 |
| The genome of C57BL/6J “Eve”, the mother of the laboratory mouse genome reference strain VK Sarsani, N Raghupathy, IT Fiddes, J Armstrong, F Thibaud-Nissen, ... G3: Genes, Genomes, Genetics 9 (6), 1795-1805, 2019 | 61 | 2019 |
| Genetic architectures of quantitative variation in RNA editing pathways T Gu, DM Gatti, A Srivastava, EM Snyder, N Raghupathy, P Simecek, ... Genetics 202 (2), 787-798, 2016 | 33 | 2016 |
| A Bayesian mixture model for the analysis of allelic expression in single cells K Choi, N Raghupathy, GA Churchill Nature communications 10 (1), 5188, 2019 | 28 | 2019 |
| Gene cluster statistics with gene families N Raghupathy, D Durand Molecular biology and evolution 26 (5), 957-968, 2009 | 28 | 2009 |
| Mapping the effects of genetic variation on chromatin state and gene expression reveals loci that control ground state pluripotency DA Skelly, A Czechanski, C Byers, S Aydin, C Spruce, C Olivier, K Choi, ... Cell Stem Cell 27 (3), 459-469. e8, 2020 | 27 | 2020 |
| Trappc9 deficiency causes parent-of-origin dependent microcephaly and obesity ZS Liang, I Cimino, B Yalcin, N Raghupathy, VE Vancollie, X Ibarra-Soria, ... PLoS Genetics 16 (9), e1008916, 2020 | 23 | 2020 |
| YBR/EiJ mice: a new model of glaucoma caused by genes on chromosomes 4 and 17 SWMJ K Saidas Nair, Mihai Cosma, Narayanan Raghupathy, Michael A Sellarole ... Disease Models and Mechanisms, 2016 | 12 | 2016 |
| Two plus two does not equal three: statistical tests for multiple genome comparison N Raghupathy, R Hoberman, D Durand Journal of bioinformatics and computational biology 6 (01), 1-22, 2008 | 11 | 2008 |
| Individual gene cluster statistics in noisy maps N Raghupathy, D Durand RECOMB Workshop on Comparative Genomics, 106-120, 2005 | 11 | 2005 |
| Reference trait analysis reveals correlations between gene expression and quantitative traits in disjoint samples DA Skelly, N Raghupathy, RF Robledo, JH Graber, EJ Chesler Genetics 212 (3), 919-929, 2019 | 9 | 2019 |
| Discovering mentorship information from author collaboration networks V Suresh, N Raghupathy, B Shekar, CEV Madhavan Discovery Science: 10th International Conference, DS 2007 Sendai, Japan …, 2007 | 8 | 2007 |
| Genotype-free individual genome reconstruction of Multiparental Population Models by RNA sequencing data K Choi, H He, DM Gatti, VM Philip, N Raghupathy, SC Munger, ... bioRxiv, 2020.10. 11.335323, 2020 | 7 | 2020 |
| Genetic variation influences pluripotent ground state stability in mouse embryonic stem cells through a hierarchy of molecular phenotypes DA Skelly, A Czechanski, C Byers, S Aydin, C Spruce, C Olivier, K Choi, ... BioRxiv, 552059, 2019 | 7 | 2019 |
| Variation in histone configurations correlates with gene expression across nine inbred strains of mice AL Tyler, C Spruce, R Kursawe, A Haber, RL Ball, WA Pitman, AD Fine, ... Genome research 33 (6), 857-871, 2023 | | 2023 |
| Author Correction: Defining the consequences of genetic variation on a proteome-wide scale JM Chick, SC Munger, P Simecek, EL Huttlin, K Choi, DM Gatti, ... Nature 606 (7915), E16-E16, 2022 | | 2022 |
| Defining the consequences of genetic variation on a proteome-wide scale (vol 534, pg 500, 2016) JM Chick, SC Munger, P Simecek, EL Huttlin, K Choi, DM Gatti, ... NATURE, 2022 | | 2022 |
Gary ChurchillThe Jackson LaboratoryVerified email at jax.org
