Roberto Pagliarini
Roberto Pagliarini
IRCCS Ospedale San Raffaele
Bestätigte E-Mail-Adresse bei hsr.it
Titel
Zitiert von
Zitiert von
Jahr
MP modelling of glucose-insulin interactions in the intravenous glucose tolerance test
V Manca, L Marchetti, R Pagliarini
Natural Computing for Simulation and Knowledge Discovery, 171-183, 2014
272014
A photosynthetic process modelled by a metabolic P system
V Manca, R Pagliarini, S Zorzan
Natural Computing 8 (4), 847-864, 2009
242009
Dissection of metabolic reprogramming in polycystic kidney disease reveals coordinated rewiring of bioenergetic pathways
C Podrini, I Rowe, R Pagliarini, ASH Costa, M Chiaravalli, I Di Meo, H Kim, ...
Communications biology 1 (1), 1-14, 2018
202018
In silico modeling of liver metabolism in a human disease reveals a key enzyme for histidine and histamine homeostasis
R Pagliarini, R Castello, F Napolitano, R Borzone, P Annunziata, ...
Cell reports 15 (10), 2292-2300, 2016
192016
Data analysis pipeline from laboratory to MP models
A Castellini, G Franco, R Pagliarini
Natural Computing 10 (1), 55-76, 2011
182011
mTORC1 upregulation leads to accumulation of the oncometabolite fumarate in a mouse model of renal cell carcinoma
L Drusian, EA Nigro, V Mannella, R Pagliarini, M Pema, ASH Costa, ...
Cell reports 24 (5), 1093-1104. e6, 2018
142018
Metabolic P systems: a discrete model for biological dynamics
V Manca, A Castellini, G Franco, L Marchetti, R Pagliarini
Chinese Journal of Electronics 22 (4), 717-723, 2013
132013
A genome-scale modeling approach to study inborn errors of liver metabolism: toward an in silico patient
R Pagliarini, D di Bernardo
Journal of Computational Biology 20 (5), 383-397, 2013
132013
Regulation and covering problems in MP systems
G Franco, V Manca, R Pagliarini
International Workshop on Membrane Computing, 242-251, 2009
72009
MP modelling for systems biology: two case studies
L Marchetti, V Manca, R Pagliarini, A Bollig-Fischer
Applications of membrane computing in systems and synthetic biology, 223-245, 2014
62014
An algorithm for initial fluxes of metabolic P systems
R Pagliarini, G Franco, V Manca
INTERNATIONAL JOURNAL OF COMPUTERS COMMUNICATIONS & CONTROL 4 (3), 263-272, 2009
62009
Toward an MP model of non-photochemical quenching
V Manca, R Pagliarini, S Zorzan
International Workshop on Membrane Computing, 299-310, 2008
32008
Combining flux balance analysis and model checking for metabolic network validation and analysis
R Pagliarini, M Sangiovanni, A Peron, D Di Bernardo
Natural Computing 14 (3), 341-354, 2015
22015
An analysis of correlative and static causality in P systems
R Pagliarini, O Agrigoroaiei, G Ciobanu, V Manca
International Conference on Membrane Computing, 323-341, 2012
22012
Metaplab 1.1 user guide
V Manca, A Castellini, G Franco, L Marchetti, R Pagliarini
Url: http://mplab. sci. univr. it, 2009
22009
In SILICO Simulations Predict a Causative Link Between Increased Glycolysis and Metabolic Reprogramming in Autosomal Dominant Polycystic Kidney Disease
R Pagliarini, A Boletta
2019 IEEE Conference on Computational Intelligence in Bioinformatics and …, 2019
2019
IN-SILICO MODELLING OF PRIMARY HYPEROXALURIA TYPE 1, A HUMAN INBORN ERROR OF LIVER METABOLISM, UNRAVELS A KEY ENZYME FOR HISTAMINE HOMEOSTASIS
R Pagliarini, R Castello, R Borzone, P Annunziata, G Mandrile, ...
INFLAMMATION RESEARCH 64, S41-S41, 2015
2015
Differential Equation Based Reverse-Engineering Algorithms: Pros and Cons
G Gambardella, R Pagliarini, F Gregoretti, G Oliva, D Di Bernardo
Gene Network Inference, 49-61, 2013
2013
Linking Bistable Dynamics to Metabolic P Systems
R Pagliarini, L Bianco, V Manca, C Bessant
Proceedings of the Eighth Brainstorming Week on Membrane Computing, 205-218 …, 2010
2010
Tutorial: Log-gain plugin for flux discovery by MetaPlab
R Pagliarini, A Castellini
2009
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