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Daniel Ziemek
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Year
An atlas of genetic influences on human blood metabolites
SY Shin, EB Fauman, AK Petersen, J Krumsiek, R Santos, J Huang, ...
Nature genetics 46 (6), 543-550, 2014
12452014
Co-clustering of biological networks and gene expression data
D Hanisch, A Zien, R Zimmer, T Lengauer
Bioinformatics 18 (suppl_1), S145-S154, 2002
4162002
ProMiner: rule-based protein and gene entity recognition
D Hanisch, K Fundel, HT Mevissen, R Zimmer, J Fluck
BMC bioinformatics 6, 1-9, 2005
4072005
From hype to reality: data science enabling personalized medicine
H Fröhlich, R Balling, N Beerenwinkel, O Kohlbacher, S Kumar, ...
BMC medicine 16, 1-15, 2018
3832018
Mapping of 79 loci for 83 plasma protein biomarkers in cardiovascular disease
L Folkersen, E Fauman, M Sabater-Lleal, RJ Strawbridge, M Frånberg, ...
PLoS genetics 13 (4), e1006706, 2017
2252017
Playing biology's name game: identifying protein names in scientific text
D Hanisch, J Fluck, HT Mevissen, R Zimmer
Biocomputing 2003, 403-414, 2002
1732002
A genome-wide association study of diabetic kidney disease in subjects with type 2 diabetes
NR Van Zuydam, E Ahlqvist, N Sandholm, H Deshmukh, NW Rayner, ...
Diabetes 67 (7), 1414-1427, 2018
1592018
HDAC inhibitors attenuate the development of hypersensitivity in models of neuropathic pain
F Denk, W Huang, B Sidders, A Bithell, M Crow, J Grist, S Sharma, ...
Pain® 154 (9), 1668-1679, 2013
1552013
Causal reasoning on biological networks: interpreting transcriptional changes
L Chindelevitch, D Ziemek, A Enayetallah, R Randhawa, B Sidders, ...
Bioinformatics 28 (8), 1114-1121, 2012
1512012
Genome-wide association analysis of self-reported events in 6135 individuals and 252 827 controls identifies 8 loci associated with thrombosis
DA Hinds, A Buil, D Ziemek, A Martinez-Perez, R Malik, L Folkersen, ...
Human molecular genetics 25 (9), 1867-1874, 2016
1352016
The genetic landscape of renal complications in type 1 diabetes
N Sandholm, N Van Zuydam, E Ahlqvist, T Juliusdottir, HA Deshmukh, ...
Journal of the American Society of Nephrology 28 (2), 557-574, 2017
1252017
Identification of novel pheno-groups in heart failure with preserved ejection fraction using machine learning
ÅK Hedman, C Hage, A Sharma, MJ Brosnan, L Buckbinder, LM Gan, ...
Heart 106 (5), 342-349, 2020
1082020
New methods for joint analysis of biological networks and expression data
F Sohler, D Hanisch, R Zimmer
Bioinformatics 20 (10), 1517-1521, 2004
1012004
ProGeM: a framework for the prioritization of candidate causal genes at molecular quantitative trait loci
D Stacey, EB Fauman, D Ziemek, BB Sun, EL Harshfield, AM Wood, ...
Nucleic acids research 47 (1), e3-e3, 2019
932019
Gene expression in chondrocytes assessed with use of microarrays
T Aigner, A Zien, D Hanisch, R Zimmer
JBJS 85 (suppl_2), 117-123, 2003
882003
Genes contributing to pain sensitivity in the normal population: an exome sequencing study
FMK Williams, S Scollen, D Cao, Y Memari, CL Hyde, B Zhang, B Sidders, ...
PLoS genetics 8 (12), e1003095, 2012
722012
Standard machine learning approaches outperform deep representation learning on phenotype prediction from transcriptomics data
AM Smith, JR Walsh, J Long, CB Davis, P Henstock, MR Hodge, ...
BMC bioinformatics 21, 1-18, 2020
602020
An unbiased lipid phenotyping approach to study the genetic determinants of lipids and their association with coronary heart disease risk factors
EL Harshfield, A Koulman, D Ziemek, L Marney, EB Fauman, DS Paul, ...
Journal of Proteome Research 18 (6), 2397-2410, 2019
602019
Interpreting transcriptional changes using causal graphs: new methods and their practical utility on public networks
CT Fakhry, P Choudhary, A Gutteridge, B Sidders, P Chen, D Ziemek, ...
BMC bioinformatics 17, 1-15, 2016
502016
Profiling of gene expression biomarkers as a classifier of methotrexate nonresponse in patients with rheumatoid arthritis
D Plant, M Maciejewski, S Smith, N Nair, ...
Arthritis & Rheumatology 71 (5), 678-684, 2019
482019
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Articles 1–20