Bulent Arman Aksoy

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Chris SanderDana-Farber Cancer Institute, Harvard Medical School, Broad Institute, Memorial Sloan KetteringVerified email at sanderlab.org
Nikolaus SchultzCenter for Molecular Oncology, Memorial Sloan Kettering Cancer CenterVerified email at cbio.mskcc.org
Ugur DogrusozProfessor of Computer Engineering, Bilkent University, Ankara, TurkeyVerified email at cs.bilkent.edu.tr
Ethan CeramiDirector, Knowledge Systems Group, Dana-Farber Cancer InstituteVerified email at jimmy.harvard.edu
JianJiong GaoMemorial Sloan Kettering Cancer CenterVerified email at cbio.mskcc.org
Anders Jacobsen SkanderupGenome Institute of SingaporeVerified email at gis.a-star.edu.sg
Jeff HammerbacherPrincipal Investigator at Hammer LabVerified email at hammerlab.org
Gideon DresdnerETH ZürichVerified email at gideonite.com
Emek DemirOHSUVerified email at ohsu.edu
Giovanni CirielloDepartment of Computational Biology, University of Lausanne (UNIL)Verified email at unil.ch
Özgün BaburAssistant Professor at University of Massachusetts BostonVerified email at umb.edu
Augustin LunaResearch Associate | Dept. of Data Science, Dana-Farber Cancer Institute, Harvard Medical SchoolVerified email at mail.nih.gov
Martin L MillerCancer Research UK, Cambridge Institute, University of CambridgeVerified email at cruk.cam.ac.uk
Ed ReznikMemorial Sloan Kettering Cancer CenterVerified email at mskcc.org
William LeeMemorial Sloan Kettering Cancer CenterVerified email at mskcc.org
Anil KorkutMD Anderson Cancer CenterVerified email at mdanderson.org
Gary BaderProfessor of Molecular Genetics and Computer Science, The Donnelly Centre, University of TorontoVerified email at utoronto.ca
Adam SiepelSimons Center for Quantitative Biology, Cold Spring Harbor LaboratoryVerified email at cshl.edu
Nicholas Paul GauthierDana Farber Cancer InstituteVerified email at jimmy.harvard.edu

Bulent Arman Aksoy

MOMA Therapeutics

Verified email at aksoy.org - Homepage

Computational Biology Genetics Bioinformatics Molecular Biology Immunology


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The cBio Cancer Genomics Portal: An Open Platform for Exploring Multidimensional Cancer Genomics Data E Cerami, J Gao, U Dogrusoz, BE Gross, SO Sumer, BA Aksoy, ... Cancer Discovery 2 (5), 401-404, 2012	8251	2012
Integrative Analysis of Complex Cancer Genomics and Clinical Profiles Using the cBioPortal J Gao, BA Aksoy, U Dogrusoz, G Dresdner, B Gross, SO Sumer, Y Sun, ... Science Signaling, scisignal. 2004088v1, 2013	7734	2013
Comprehensive molecular portraits of human breast tumours Cancer Genome Atlas Network Nature 490 (7418), 61, 2012	7604	2012
Comprehensive molecular characterization of human colon and rectal cancer DM Muzny, MN Bainbridge, K Chang, HH Dinh, JA Drummond, G Fowler, ... Nature 487, 330-337, 2012	5010	2012
The somatic genomic landscape of glioblastoma CW Brennan, RGW Verhaak, A McKenna, B Campos, H Noushmehr, ... Cell 155 (2), 462-477, 2013	3205	2013
Integrated genomic characterization of endometrial carcinoma DA Levine Nature 497 (7447), 67-73, 2013	2815	2013
Comprehensive molecular profiling of lung adenocarcinoma Cancer Genome Atlas Research Network Nature 511 (7511), 543, 2014	2780	2014
Comprehensive genomic characterization of squamous cell lung cancers. PS Hammerman, DN Hayes, MD Wilkerson, N Schultz, R Bose, A Chu, ... Nature 489 (7417), 519-525, 2012	2647*	2012
Comprehensive molecular characterization of urothelial bladder carcinoma Cancer Genome Atlas Research Network Nature 507 (7492), 315, 2014	1798	2014
Comprehensive, integrative genomic analysis of diffuse lower-grade gliomas Cancer Genome Atlas Research Network New England Journal of Medicine 372 (26), 2481-2498, 2015	1771	2015
Genomic classification of cutaneous melanoma R Akbani, KC Akdemir, BA Aksoy, M Albert, A Ally, SB Amin, H Arachchi, ... Cell 161 (7), 1681-1696, 2015	1519	2015
Integrated genomic characterization of papillary thyroid carcinoma N Agrawal, R Akbani, BA Aksoy, A Ally, H Arachchi, SL Asa, JT Auman, ... Cell 159 (3), 676-690, 2014	1428	2014
Emerging landscape of oncogenic signatures across human cancers G Ciriello, ML Miller, BA Aksoy, Y Senbabaoglu, N Schultz, C Sander Nature genetics 45 (10), 1127-1133, 2013	1102	2013
An integrated metabolic atlas of clear cell renal cell carcinoma AA Hakimi, E Reznik, CH Lee, CJ Creighton, AR Brannon, A Luna, ... Cancer cell 29 (1), 104-116, 2016	334	2016
Characterization of HPV and host genome interactions in primary head and neck cancers M Parfenov, CS Pedamallu, N Gehlenborg, SS Freeman, L Danilova, ... Proceedings of the National Academy of Sciences 111 (43), 15544-15549, 2014	265	2014
Contribution of systemic and somatic factors to clinical response and resistance to PD-L1 blockade in urothelial cancer: an exploratory multi-omic analysis A Snyder, T Nathanson, SA Funt, A Ahuja, J Buros Novik, MD Hellmann, ... PLoS medicine 14 (5), e1002309, 2017	151	2017
Systematic identification of cancer driving signaling pathways based on mutual exclusivity of genomic alterations Ö Babur, M Gönen, BA Aksoy, N Schultz, G Ciriello, C Sander, E Demir Genome biology 16 (1), 1-10, 2015	128	2015
Genome-wide inference of natural selection on human transcription factor binding sites L Arbiza, I Gronau, BA Aksoy, MJ Hubisz, B Gulko, A Keinan, A Siepel Nature genetics 45 (7), 723-729, 2013	123	2013
The cBio cancer genomics portal: an open platform for exploring multidimensional cancer genomics data. Cancer Discov. 2012; 2 (5): 401–4 E Cerami, J Gao, U Dogrusoz, BE Gross, SO Sumer, BA Aksoy, ...	103	2012
Pan-cancer analysis of mutation hotspots in protein domains ML Miller, E Reznik, NP Gauthier, BA Aksoy, A Korkut, J Gao, G Ciriello, ... Cell systems 1 (3), 197-209, 2015	82	2015

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