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Ryan McClure
Ryan McClure
Verified email at pnnl.gov
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Cited by
Cited by
Year
Microbiome definition re-visited: old concepts and new challenges
G Berg, D Rybakova, D Fischer, T Cernava, MCC Vergès, T Charles, ...
Microbiome 8, 1-22, 2020
14562020
Computational analysis of bacterial RNA-Seq data
R McClure, D Balasubramanian, Y Sun, M Bobrovskyy, P Sumby, ...
Nucleic acids research 41 (14), e140-e140, 2013
6412013
TLR-dependent human mucosal epithelial cell responses to microbial pathogens
R McClure, P Massari
Frontiers in immunology 5, 91040, 2014
3252014
Soil microbiomes under climate change and implications for carbon cycling
D Naylor, N Sadler, A Bhattacharjee, EB Graham, CR Anderton, ...
Annual Review of Environment and Resources 45 (1), 29-59, 2020
1742020
Microbiome definition re-visited: old concepts and new challenges. Microbiome 8: 103
G Berg, D Rybakova, D Fischer, T Cernava, MCC Vergès, T Charles, ...
Epub 2020/07/02. https://doi. org/10.1186/s40168-020-00875-0. PubMed PMID …, 2020
1522020
Trends in microbial community composition and function by soil depth
D Naylor, R McClure, J Jansson
Microorganisms 10 (3), 540, 2022
712022
The gonococcal transcriptome during infection of the lower genital tract in women
R McClure, K Nudel, P Massari, B Tjaden, X Su, PA Rice, CA Genco
PloS one 10 (8), e0133982, 2015
632015
Selection, succession, and stabilization of soil microbial consortia
EK Zegeye, CJ Brislawn, Y Farris, SJ Fansler, KS Hofmockel, JK Jansson, ...
Msystems 4 (4), 10.1128/msystems. 00055-19, 2019
542019
Role of Hfq in iron-dependent and -independent gene regulation in Neisseria meningitidis
JR Mellin, R McClure, D Lopez, O Green, B Reinhard, C Genco
Microbiology 156 (8), 2316-2326, 2010
532010
Coupling genome-wide transcriptomics and developmental toxicity profiles in zebrafish to characterize polycyclic aromatic hydrocarbon (PAH) hazard
P Shankar, MC Geier, L Truong, RS McClure, P Pande, KM Waters, ...
International journal of molecular sciences 20 (10), 2570, 2019
492019
Unlocking the constraints of cyanobacterial productivity: acclimations enabling ultrafast growth
HC Bernstein, RS McClure, EA Hill, LM Markillie, WB Chrisler, MF Romine, ...
MBio 7 (4), 10.1128/mbio. 00949-16, 2016
422016
Development of microbiome biobanks–challenges and opportunities
MJ Ryan, M Schloter, G Berg, T Kostic, LL Kinkel, K Eversole, JA Macklin, ...
Trends in Microbiology 29 (2), 89-92, 2021
382021
Phenotypic responses to interspecies competition and commensalism in a naturally-derived microbial co-culture
N Khan, Y Maezato, RS McClure, CJ Brislawn, JM Mobberley, N Isern, ...
Scientific reports 8 (1), 297, 2018
312018
Transcriptome analysis of Neisseria gonorrhoeae during natural infection reveals differential expression of antibiotic resistance determinants between men and women
K Nudel, R McClure, M Moreau, E Briars, AJ Abrams, B Tjaden, XH Su, ...
Msphere 3 (3), 10.1128/mspheredirect. 00312-18, 2018
30*2018
Characterization of the Neisseria gonorrhoeae iron and Fur regulatory network
C Yu, R McClure, K Nudel, N Daou, CA Genco
Journal of bacteriology 198 (16), 2180-2191, 2016
292016
Identification of sRNAs expressed by the human pathogen Neisseria gonorrhoeae under disparate growth conditions
R McClure, B Tjaden, C Genco
Frontiers in microbiology 5, 100697, 2014
292014
Deconstructing the soil microbiome into reduced-complexity functional modules
D Naylor, S Fansler, C Brislawn, WC Nelson, KS Hofmockel, JK Jansson, ...
MBio 11 (4), 10.1128/mbio. 01349-20, 2020
282020
Network analysis of transcriptomics expands regulatory landscapes in Synechococcus sp. PCC 7002
RS McClure, CC Overall, JE McDermott, EA Hill, LM Markillie, LA McCue, ...
Nucleic acids research 44 (18), 8810-8825, 2016
262016
Fast and scalable implementations of influence maximization algorithms
M Minutoli, M Halappanavar, A Kalyanaraman, A Sathanur, R Mcclure, ...
2019 IEEE International Conference on Cluster Computing (CLUSTER), 1-12, 2019
232019
Indirect interspecies regulation: transcriptional and physiological responses of a cyanobacterium to heterotrophic partnership
HC Bernstein, RS McClure, V Thiel, NC Sadler, YM Kim, WB Chrisler, ...
MSystems 2 (2), e00181-16, 2017
23*2017
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Articles 1–20