J. Harry Caufield
Titel
Zitiert von
Zitiert von
Jahr
Global landscape of cell envelope protein complexes in Escherichia coli
M Babu, C Bundalovic-Torma, C Calmettes, S Phanse, Q Zhang, Y Jiang, ...
Nature biotechnology 36 (1), 103-112, 2018
652018
The yeast two-hybrid system: a tool for mapping protein–protein interactions
J Mehla, JH Caufield, P Uetz
Cold Spring Harbor Protocols 2015 (5), pdb. top083345, 2015
472015
A comparison and optimization of yeast two-hybrid systems
JH Caufield, N Sakhawalkar, P Uetz
Methods 58 (4), 317-324, 2012
422012
Studying protein complexes by the yeast two-hybrid system
SV Rajagopala, P Sikorski, JH Caufield, A Tovchigrechko, P Uetz
Methods 58 (4), 392-399, 2012
362012
A comparison of two-hybrid approaches for detecting protein–protein interactions
J Mehla, JH Caufield, N Sakhawalkar, P Uetz
Methods in enzymology 586, 333-358, 2017
262017
Mapping protein–protein interactions using yeast two-hybrid assays
J Mehla, JH Caufield, P Uetz
Cold Spring Harbor Protocols 2015 (5), pdb. prot086157, 2015
222015
Specific N‐terminal cleavage of ribosomal protein L27 in Staphylococcus aureus and related bacteria
EA Wall, JH Caufield, CE Lyons, KA Manning, T Dokland, GE Christie
Molecular microbiology 95 (2), 258-269, 2015
222015
Bacterial protein meta-interactomes predict cross-species interactions and protein function
JH Caufield, C Wimble, S Shary, S Wuchty, P Uetz
Bmc Bioinformatics 18 (1), 1-14, 2017
192017
The protein interactome of mycobacteriophage Giles predicts functions for unknown proteins
J Mehla, RM Dedrick, JH Caufield, R Siefring, M Mair, A Johnson, ...
Journal of bacteriology 197 (15), 2508-2516, 2015
172015
Protein complexes in bacteria
JH Caufield, M Abreu, C Wimble, P Uetz
PLoS Comput Biol 11 (2), e1004107, 2015
152015
A reference set of curated biomedical data and metadata from clinical case reports
JH Caufield, Y Zhou, AO Garlid, SP Setty, DA Liem, Q Cao, JM Lee, ...
Scientific data 5 (1), 1-18, 2018
132018
Phrase mining of textual data to analyze extracellular matrix protein patterns across cardiovascular disease
DA Liem, S Murali, D Sigdel, Y Shi, X Wang, J Shen, H Choi, JH Caufield, ...
American Journal of Physiology-Heart and Circulatory Physiology 315 (4 …, 2018
122018
Virus-host protein-protein interactions of mycobacteriophage Giles
J Mehla, RM Dedrick, JH Caufield, J Wagemans, N Sakhawalkar, ...
Scientific reports 7 (1), 1-10, 2017
82017
Evidenceminer: Textual evidence discovery for life sciences
X Wang, Y Guan, W Liu, A Chauhan, E Jiang, Q Li, D Liem, D Sigdel, ...
Proceedings of the 58th Annual Meeting of the Association for Computational …, 2020
62020
The yeast two-hybrid system: a tool for mapping protein-protein interactions. Cold Spring Harb Protoc 2015: 425–430
J Mehla, JH Caufield, P Uetz
62015
Clinical temporal relation extraction with probabilistic soft logic regularization and global inference
Y Zhou, Y Yan, R Han, JH Caufield, KW Chang, Y Sun, P Ping, W Wang
arXiv preprint arXiv:2012.08790, 2020
42020
A metadata extraction approach for clinical case reports to enable advanced understanding of biomedical concepts
JH Caufield, DA Liem, AO Garlid, Y Zhou, K Watson, AAT Bui, W Wang, ...
Journal of visualized experiments: JoVE, 2018
42018
Proteome Data Improves Protein Function Prediction in the Interactome of Helicobacter pylori
S Wuchty, SA Müller, JH Caufield, R Häuser, P Aloy, S Kalkhof, P Uetz
Molecular & Cellular Proteomics 17 (5), 961-973, 2018
22018
New advances in extracting and learning from protein–protein interactions within unstructured biomedical text data
JH Caufield, P Ping
Emerging Topics in Life Sciences 3 (4), 357-369, 2019
12019
A Comprehensive Typing System for Information Extraction from Clinical Narratives
JH Caufield, Y Zhou, Y Bai, DA Liem, AO Garlid, KW Chang, Y Sun, ...
medRxiv, 19009118, 2019
12019
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